Comparing WP_087412571.1 NCBI__GCF_900129655.1:WP_087412571.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P0AAH0 Phosphate import ATP-binding protein PstB; ABC phosphate transporter; Phosphate-transporting ATPase; EC 7.3.2.1 from Escherichia coli (strain K12) (see paper)
59% identity, 100% coverage: 2:250/250 of query aligns to 9:257/257 of P0AAH0
Sites not aligning to the query:
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
38% identity, 97% coverage: 4:245/250 of query aligns to 3:236/241 of 4u00A
3c4jA Abc protein artp in complex with atp-gamma-s
38% identity, 100% coverage: 1:249/250 of query aligns to 1:242/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
38% identity, 100% coverage: 1:249/250 of query aligns to 1:242/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
38% identity, 100% coverage: 1:249/250 of query aligns to 1:242/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
38% identity, 100% coverage: 1:249/250 of query aligns to 1:242/242 of 2oljA
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
37% identity, 96% coverage: 8:246/250 of query aligns to 6:237/240 of 4ymuJ
7ahhC Opua inhibited inward-facing, sbd docked (see paper)
41% identity, 86% coverage: 23:236/250 of query aligns to 46:254/382 of 7ahhC
Sites not aligning to the query:
7aheC Opua inhibited inward facing (see paper)
41% identity, 86% coverage: 23:236/250 of query aligns to 46:254/382 of 7aheC
Sites not aligning to the query:
7ahdC Opua (e190q) occluded (see paper)
41% identity, 86% coverage: 23:236/250 of query aligns to 46:254/260 of 7ahdC
Sites not aligning to the query:
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
34% identity, 92% coverage: 16:245/250 of query aligns to 18:241/343 of P30750
Sites not aligning to the query:
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
33% identity, 92% coverage: 16:245/250 of query aligns to 19:242/344 of 6cvlD
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
33% identity, 92% coverage: 16:245/250 of query aligns to 19:242/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
33% identity, 92% coverage: 16:245/250 of query aligns to 19:242/344 of 3tuiC
Sites not aligning to the query:
P02915 Histidine/lysine/arginine/ornithine transport ATP-binding protein HisP; EC 7.4.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
36% identity, 98% coverage: 2:247/250 of query aligns to 5:255/258 of P02915
1b0uA Atp-binding subunit of the histidine permease from salmonella typhimurium (see paper)
36% identity, 98% coverage: 2:247/250 of query aligns to 1:251/258 of 1b0uA
6qexA Nanodisc reconstituted human abcb1 in complex with uic2 fab and taxol (see paper)
33% identity, 88% coverage: 15:233/250 of query aligns to 955:1167/1182 of 6qexA
Sites not aligning to the query:
7o9wA Encequidar-bound human p-glycoprotein in complex with uic2-fab (see paper)
33% identity, 88% coverage: 15:235/250 of query aligns to 942:1156/1169 of 7o9wA
Sites not aligning to the query:
P21439 Phosphatidylcholine translocator ABCB4; ATP-binding cassette sub-family B member 4; Multidrug resistance protein 3; P-glycoprotein 3; EC 7.6.2.1 from Homo sapiens (Human) (see 22 papers)
36% identity, 92% coverage: 4:232/250 of query aligns to 394:617/1286 of P21439