Comparing WP_090220583.1 NCBI__GCF_002796795.1:WP_090220583.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P0A962 L-asparaginase 1; L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I; EC 3.5.1.1 from Escherichia coli (strain K12) (see paper)
35% identity, 99% coverage: 3:315/316 of query aligns to 6:335/338 of P0A962
6nxcB Ecai(t162a) mutant in complex with citrate at ph 4 (see paper)
34% identity, 99% coverage: 3:315/316 of query aligns to 13:334/336 of 6nxcB
2himA Crystal structure and allosteric regulation of the cytoplasmic escherichia coli l-asparaginase i (see paper)
33% identity, 99% coverage: 3:315/316 of query aligns to 4:323/324 of 2himA
5ot0A The thermostable l-asparaginase from thermococcus kodakarensis (see paper)
33% identity, 100% coverage: 1:315/316 of query aligns to 1:326/328 of 5ot0A
4r8lA Crystal structure of the asp-bound guinea pig l-asparaginase 1 catalytic domain (see paper)
34% identity, 99% coverage: 5:316/316 of query aligns to 6:353/354 of 4r8lA
5dndD Crystal structure of the asn-bound guinea pig l-asparaginase 1 catalytic domain active site mutant t116a (see paper)
34% identity, 99% coverage: 5:316/316 of query aligns to 6:353/357 of 5dndD
7r6bB Crystal structure of mutant r43d/l124d/r125a/c273s of l-asparaginase i from yersinia pestis (see paper)
34% identity, 99% coverage: 3:315/316 of query aligns to 4:300/301 of 7r6bB
Q8TZE8 L-asparaginase; EC 3.5.1.1 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see 2 papers)
28% identity, 99% coverage: 1:314/316 of query aligns to 1:324/326 of Q8TZE8
4q0mA Crystal structure of pyrococcus furiosus l-asparaginase (see paper)
28% identity, 99% coverage: 1:314/316 of query aligns to 2:325/327 of 4q0mA
1zq1A Structure of gatde tRNA-dependent amidotransferase from pyrococcus abyssi (see paper)
27% identity, 83% coverage: 54:315/316 of query aligns to 143:427/437 of 1zq1A
Sites not aligning to the query:
4njeA Crystal structure of pyrococcus furiosus l-asparaginase with ligand (see paper)
32% identity, 59% coverage: 1:185/316 of query aligns to 1:182/182 of 4njeA
5b5uA Crystal structure of truncated pyrococcus furiosus l-asparaginase with peptide (see paper)
32% identity, 54% coverage: 1:171/316 of query aligns to 1:167/175 of 5b5uA
Sites not aligning to the query:
2wltA The crystal structure of helicobacter pylori l-asparaginase at 1.4 a resolution (see paper)
29% identity, 69% coverage: 80:298/316 of query aligns to 82:315/326 of 2wltA
Sites not aligning to the query:
P10182 Glutaminase-asparaginase; L-ASNase/L-GLNase; L-asparagine/L-glutamine amidohydrolase; PGA; EC 3.5.1.38 from Pseudomonas sp. (strain ATCC 29598 / 7A) (see paper)
30% identity, 58% coverage: 77:260/316 of query aligns to 90:290/337 of P10182
Sites not aligning to the query:
8h4aB Blasnase-t13a/m57p
31% identity, 72% coverage: 78:306/316 of query aligns to 79:322/328 of 8h4aB
6wyyA Crystal structure of pseudomonas 7a glutaminase-asparaginase in complex with l-glu at ph 6.5
31% identity, 58% coverage: 77:260/316 of query aligns to 68:268/315 of 6wyyA
Sites not aligning to the query:
6wywA Crystal structure of pseudomonas 7a glutaminase-asparaginase in complex with l-asp at ph 4.5
31% identity, 58% coverage: 77:260/316 of query aligns to 70:270/317 of 6wywA
Sites not aligning to the query:
7c8xA Blasnase-t13a with l-asn (see paper)
31% identity, 70% coverage: 78:298/316 of query aligns to 78:312/319 of 7c8xA
Sites not aligning to the query:
7c8qA Blasnase-t13a with d-asn (see paper)
31% identity, 70% coverage: 78:298/316 of query aligns to 79:313/321 of 7c8qA
Sites not aligning to the query:
7cbuA Blasnase-t13a with l-asp (see paper)
31% identity, 70% coverage: 78:298/316 of query aligns to 76:310/318 of 7cbuA
Sites not aligning to the query:
>WP_090220583.1 NCBI__GCF_002796795.1:WP_090220583.1
MRIRVIHTGGTIGMVQTEAGFAPKAGLLEGALDEMQAKGQLSVAYDLIAAEPLIDSAEAQ
PADWNWIAADIASHHADYDGFVVTHGTDSLSFTAAALALALGGLAKPVILTGSMVPLSVA
GNDGLRNLGDAMAAVHTAGPGVWVQFAGHLLPGARVQKLHSTGFEAFAALGDFAPSHQGG
DVVVRHPFADHEVAIVTVAPGLRGHLVGAALSGADGVILRCFGSGTVPDREGFRAALMAA
TARDVPILAISQCPQGGMVIGTYAAGALLVDAKAIDGRDLTLEAAYAKMMMALSRFDDIE
ARRAYLAQPQCAEMTV
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory