Comparing WP_090272172.1 NCBI__GCF_900105005.1:WP_090272172.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
P9WKJ5 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
30% identity, 94% coverage: 21:597/612 of query aligns to 8:574/575 of P9WKJ5
6ovtA Crystal structure of ilvd from mycobacterium tuberculosis (see paper)
31% identity, 87% coverage: 67:597/612 of query aligns to 38:561/562 of 6ovtA
Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
31% identity, 77% coverage: 113:585/612 of query aligns to 132:587/608 of Q9LIR4
Sites not aligning to the query:
9jpiA The complex structure of dhad with aspterric acid (aa). (see paper)
30% identity, 78% coverage: 110:585/612 of query aligns to 91:549/570 of 9jpiA
Sites not aligning to the query:
8hs0A The mutant structure of dhad v178w (see paper)
31% identity, 78% coverage: 110:585/612 of query aligns to 91:549/570 of 8hs0A
Sites not aligning to the query:
Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense (see paper)
29% identity, 82% coverage: 68:569/612 of query aligns to 44:535/583 of Q1JUQ1
8ej0A Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mg (see paper)
28% identity, 83% coverage: 68:576/612 of query aligns to 38:535/568 of 8ej0A
8epzA Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn
28% identity, 83% coverage: 68:576/612 of query aligns to 39:536/569 of 8epzA
8imuA Dihydroxyacid dehydratase (dhad) mutant-v497f (see paper)
29% identity, 78% coverage: 110:585/612 of query aligns to 88:502/523 of 8imuA
Sites not aligning to the query:
B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304) (see 2 papers)
30% identity, 81% coverage: 68:561/612 of query aligns to 47:536/579 of B5ZZ34
9evvD His579leu variant of l-arabinonate dehydratase co-crystallized with 2- oxobutyrate (see paper)
29% identity, 82% coverage: 68:570/612 of query aligns to 43:534/575 of 9evvD
9evvA His579leu variant of l-arabinonate dehydratase co-crystallized with 2- oxobutyrate (see paper)
29% identity, 82% coverage: 68:570/612 of query aligns to 43:534/575 of 9evvA
5j85A Ser480ala mutant of l-arabinonate dehydratase (see paper)
29% identity, 82% coverage: 68:570/612 of query aligns to 44:535/576 of 5j85A
7m3kA Crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308
26% identity, 72% coverage: 127:568/612 of query aligns to 94:540/587 of 7m3kA
Sites not aligning to the query:
Q9A9Z2 D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) (Caulobacter crescentus) (see 2 papers)
27% identity, 71% coverage: 127:563/612 of query aligns to 105:545/595 of Q9A9Z2
Sites not aligning to the query:
5oynA Crystal structure of d-xylonate dehydratase in holo-form (see paper)
27% identity, 71% coverage: 127:563/612 of query aligns to 99:539/589 of 5oynA
Sites not aligning to the query:
>WP_090272172.1 NCBI__GCF_900105005.1:WP_090272172.1
MHPRVIEVTERLVERSRLSRAAYLQQMAEAAARPRGRRDLSCSNFAHGMAGCSAVDKDRL
RMVDEVNIGMVTAYNDMLSAHQPYETYPAQIREALRAFGATGQVAGGVPAMCDGVTQGEP
GMELSLVSRDVIAMGTAIALSHNMFDAALCLGICDKIVPGLLMGALRFGHLPILFVPAGP
MPSGLPNSEKALVRQRFAEGLATREELLDAESKAYHAPGTCTFYGTANTNQMLLEAMGLQ
LPGASFINPGTPLRDALTVHVAEQAARLARAGEGSLASILDERALVNALVVLLATGGSTN
LTLHLIAIGQCAGLQLNWSDMAELSEVVPTLARIYPNGQADVNHFQAAGGSAFLFAQLLE
GGLLHADVNTIAGPGLQRYTHEPTLVDGRLAWRDGPAASLDDSILRSLRAPFKVDGGLRL
VEGDLGRSVIKVSAVKPEHWQVSAPCRTFVTQEAFVTAFQNNEFDSDVIVVIRFQGPAAN
GMPELHKLTPYLGVLQDRGLRVALVTDGRMSGASGKVPAVIHMSPEAHSGGPIACLRDGD
ILDLDADRGTLLVRMDEAEWQSRTPAVHPQPVRRGWGRELFAFARTAASPAEQGASCFTE
SLIQADGGQHDD
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Lawrence Berkeley National Laboratory