Comparing WP_090443965.1 NCBI__GCF_900100495.1:WP_090443965.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3c4jA Abc protein artp in complex with atp-gamma-s
55% identity, 99% coverage: 1:241/243 of query aligns to 1:241/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
55% identity, 99% coverage: 1:241/243 of query aligns to 1:241/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
55% identity, 99% coverage: 1:241/243 of query aligns to 1:241/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
55% identity, 99% coverage: 1:241/243 of query aligns to 1:241/242 of 2oljA
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
54% identity, 98% coverage: 3:241/243 of query aligns to 1:239/240 of 4ymuJ
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
54% identity, 99% coverage: 2:241/243 of query aligns to 1:239/241 of 4u00A
P02915 Histidine/lysine/arginine/ornithine transport ATP-binding protein HisP; EC 7.4.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
51% identity, 97% coverage: 4:238/243 of query aligns to 7:253/258 of P02915
1b0uA Atp-binding subunit of the histidine permease from salmonella typhimurium (see paper)
51% identity, 97% coverage: 4:238/243 of query aligns to 3:249/258 of 1b0uA
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
39% identity, 99% coverage: 1:241/243 of query aligns to 2:244/343 of P30750
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
39% identity, 99% coverage: 1:241/243 of query aligns to 3:245/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
39% identity, 99% coverage: 1:241/243 of query aligns to 3:245/344 of 3tuiC
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
39% identity, 99% coverage: 1:241/243 of query aligns to 3:245/344 of 6cvlD
5lilA Structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) (see paper)
39% identity, 89% coverage: 1:216/243 of query aligns to 1:220/615 of 5lilA
5lj7A Structure of aggregatibacter actinomycetemcomitans macb bound to atp (p21) (see paper)
39% identity, 89% coverage: 1:216/243 of query aligns to 1:220/592 of 5lj7A
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
36% identity, 99% coverage: 3:243/243 of query aligns to 17:253/378 of P69874
Sites not aligning to the query:
P0AAH0 Phosphate import ATP-binding protein PstB; ABC phosphate transporter; Phosphate-transporting ATPase; EC 7.3.2.1 from Escherichia coli (strain K12) (see paper)
37% identity, 98% coverage: 2:238/243 of query aligns to 9:252/257 of P0AAH0
Sites not aligning to the query:
2d62A Crystal structure of multiple sugar binding transport atp- binding protein
35% identity, 99% coverage: 1:240/243 of query aligns to 4:245/375 of 2d62A
8g4cB Bceabs atpgs high res tm (see paper)
36% identity, 88% coverage: 3:217/243 of query aligns to 3:222/248 of 8g4cB
7tchB Bceab e169q variant atp-bound conformation (see paper)
35% identity, 88% coverage: 3:217/243 of query aligns to 2:221/245 of 7tchB
P19566 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
39% identity, 99% coverage: 1:240/243 of query aligns to 4:236/369 of P19566
Sites not aligning to the query:
>WP_090443965.1 NCBI__GCF_900100495.1:WP_090443965.1
MSLLNVTALHKYYGDNHVLKGIDLAVEEGQVVAIIGRSGSGKSTLLRTLNGLESIDDGVI
EVDGEYLDAARADLRSLRQKVGMVFQQFNLFPHLSVGENIMLAPQVVKKLAREEAAQLAR
QMLERVGLGEKFDAYPERLSGGQQQRVAIARALAMSPRVLLCDEITSALDPELVNEVLAV
VKQLASEGMTLIMVTHEMRFAREVGDKLVFMHQGKVHEVGAPRTLFAEPQTAELRNFIGS
VNL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory