Comparing WP_090447154.1 NCBI__GCF_900100495.1:WP_090447154.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
7cagA Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state (see paper)
28% identity, 56% coverage: 86:211/224 of query aligns to 151:275/285 of 7cagA
>WP_090447154.1 NCBI__GCF_900100495.1:WP_090447154.1
MDWPALLLSLQLAFWTMLILLPLGVWIGRKLAWSRFRGKSLVEALLALPLVLPPTVLGFY
LLLALGADSPLGRAYQSLFGAQLTFSFAGLLIASVLFNLPFAIQPMQRAFEAIPREVREA
ARCCGLSPWRVLRRIELPLAWPGILSALVLTFAHTLGEFGVVLMVGGSIPGETRTIAIAI
YDRVQAFDDQAAGVMSAVLLLISLAAIGLSYFATARLARSQTHD
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory