Comparing WP_090448409.1 NCBI__GCF_900100495.1:WP_090448409.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
4ymtC Crystal structure of an amino acid abc transporter complex with arginines (see paper)
33% identity, 96% coverage: 1:221/231 of query aligns to 1:213/215 of 4ymtC
4ymwC Crystal structure of an amino acid abc transporter with histidines (see paper)
33% identity, 96% coverage: 1:221/231 of query aligns to 1:213/214 of 4ymwC
>WP_090448409.1 NCBI__GCF_900100495.1:WP_090448409.1
MTFDLYGFGPALAAGTLMTIKLALSALSLGLLLGLLGALAKTSPYKPLQWLGGTYSTIVR
GVPELLWVLLIYFGTVNLMRNLADLLGLASLELNAFAAGTIALGLCFGAYATEVFRGAIL
AIPKGHREAGLALGLSKPRIFWRLILPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIM
RRSQIAVTASKQPFTFFLVAAFIYLGLTVLAMIGLHFLEKRASRGFIRSAA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory