SitesBLAST
Comparing WP_090560791.1 NCBI__GCF_900101615.1:WP_090560791.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6dkhC The crystal structure of l-idonate 5-dehydrogenase from escherichia coli str. K-12 substr. Mg1655
43% identity, 100% coverage: 2:343/343 of query aligns to 9:346/346 of 6dkhC
1pl6A Human sdh/nadh/inhibitor complex (see paper)
36% identity, 95% coverage: 3:328/343 of query aligns to 10:335/356 of 1pl6A
- active site: C44 (= C37), G45 (= G38), S46 (= S39), H49 (= H42), H69 (= H62), E70 (= E63), R99 (≠ C92), D102 (≠ C95), C105 (= C98), S113 (≠ C106), F117 (≠ R110), P156 (= P153), G160 (≠ C157)
- binding 4-[2-(hydroxymethyl)pyrimidin-4-yl]-n,n-dimethylpiperazine-1-sulfonamide: C44 (= C37), S46 (= S39), I56 (≠ F49), F59 (≠ V52), H69 (= H62), E155 (= E152), L274 (= L268), F297 (= F290)
- binding nicotinamide-adenine-dinucleotide: G181 (= G178), P182 (= P179), I183 (= I180), D203 (= D200), L204 (= L201), R208 (≠ P205), C249 (≠ A243), T250 (≠ S244), V272 (≠ L266), G273 (= G267), L274 (= L268), F297 (= F290), R298 (= R291)
- binding zinc ion: C44 (= C37), H69 (= H62)
Sites not aligning to the query:
Q00796 Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens (Human) (see 10 papers)
36% identity, 95% coverage: 3:328/343 of query aligns to 11:336/357 of Q00796
- C45 (= C37) binding Zn(2+)
- H70 (= H62) binding Zn(2+)
- E71 (= E63) binding Zn(2+)
- R110 (= R102) to P: in HMNR8; results in protein aggregation
- H135 (≠ C131) to R: in HMNR8; results in protein aggregation
- A153 (= A149) to D: in HMNR8; uncertain significance; results in protein aggregation; dbSNP:rs145813597
- I184 (= I180) binding NAD(+)
- D204 (= D200) binding NAD(+)
- R209 (≠ P205) binding NAD(+)
- Q239 (≠ Y236) to L: in dbSNP:rs1042079
- N269 (≠ V262) to T: in dbSNP:rs930337
- VGL 273:275 (≠ LGL 266:268) binding NAD(+)
- VFR 297:299 (≠ TFR 289:291) binding NAD(+)
- V322 (≠ L314) to I: in HMNR8; uncertain significance; dbSNP:rs149975952
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
3qe3A Sheep liver sorbitol dehydrogenase (see paper)
34% identity, 99% coverage: 3:341/343 of query aligns to 5:342/351 of 3qe3A
- active site: C39 (= C37), G40 (= G38), S41 (= S39), H44 (= H42), H64 (= H62), E65 (= E63), R94 (≠ C92), D97 (≠ C95), C100 (= C98), S108 (≠ C106), F112 (≠ R110), P151 (= P153), G155 (≠ C157), K339 (= K338)
- binding glycerol: Y45 (= Y43), F54 (≠ V52), T116 (≠ S114), R293 (= R291)
- binding zinc ion: C39 (= C37), H64 (= H62), E65 (= E63)
P27867 Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus (Rat) (see paper)
33% identity, 99% coverage: 3:341/343 of query aligns to 11:348/357 of P27867
- C45 (= C37) binding Zn(2+)
- H70 (= H62) binding Zn(2+)
- E71 (= E63) binding Zn(2+)
- E156 (= E152) binding Zn(2+)
- D204 (= D200) binding NAD(+)
- R209 (≠ P205) binding NAD(+)
- VGM 273:275 (≠ LGL 266:268) binding NAD(+)
- VFR 297:299 (≠ TFR 289:291) binding NAD(+)
P07846 Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Ovis aries (Sheep) (see paper)
33% identity, 99% coverage: 3:341/343 of query aligns to 9:345/354 of P07846
- C43 (= C37) binding Zn(2+)
- Y49 (= Y43) binding substrate
- H67 (= H62) binding Zn(2+)
- E68 (= E63) binding Zn(2+)
- E153 (= E152) binding substrate
- R296 (= R291) binding substrate
- Y297 (≠ F292) binding substrate
1e3jA Ketose reductase (sorbitol dehydrogenase) from silverleaf whitefly (see paper)
33% identity, 99% coverage: 3:342/343 of query aligns to 4:345/348 of 1e3jA
- active site: C38 (= C37), G39 (= G38), S40 (= S39), H43 (= H42), H63 (= H62), E64 (= E63), C93 (= C92), C96 (= C95), C99 (= C98), C107 (= C106), T111 (≠ R110), P150 (= P153), G154 (≠ C157), K341 (= K338)
- binding phosphate ion: A174 (= A177), A196 (≠ D200), R197 (≠ L201), S198 (≠ H202), R201 (≠ P205)
- binding zinc ion: C38 (= C37), H63 (= H62), E64 (= E63), C93 (= C92), C96 (= C95), C99 (= C98), C107 (= C106)
4ilkA Crystal structure of short chain alcohol dehydrogenase (rspb) from e. Coli cft073 (efi target efi-506413) complexed with cofactor nadh
33% identity, 100% coverage: 1:343/343 of query aligns to 4:337/337 of 4ilkA
- active site: C40 (= C37), G41 (= G38), S42 (= S39), H45 (= H42), H59 (= H62), E60 (= E63), C89 (= C92), C92 (= C95), C95 (= C98), C103 (= C106), A107 (≠ R110), P145 (= P153), A149 (≠ C157), K332 (= K338)
- binding manganese (ii) ion: C40 (= C37), H59 (= H62), E60 (= E63), E144 (= E152)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G168 (= G176), G170 (= G178), P171 (= P179), I172 (= I180), D193 (= D200), R194 (≠ L201), R198 (≠ P205), N213 (≠ M220), A235 (= A243), A236 (≠ S244), C237 (≠ G245), I241 (≠ A249), M258 (≠ L266), F260 (≠ L268)
- binding zinc ion: C89 (= C92), C92 (= C95), C95 (= C98), C103 (= C106)
7y9pA Xylitol dehydrogenase s96c/s99c/y102c mutant(thermostabilized form) from pichia stipitis (see paper)
33% identity, 95% coverage: 3:329/343 of query aligns to 5:342/357 of 7y9pA
A2QAC0 L-arabinitol 4-dehydrogenase; LAD; EC 1.1.1.12 from Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) (see 2 papers)
34% identity, 92% coverage: 25:341/343 of query aligns to 43:370/386 of A2QAC0
- M70 (≠ V52) mutation to F: Abolishes enzyme activity.
- DI 213:214 (≠ DL 200:201) mutation to SR: Alters cofactor specificity from NAD to NADP; when associated with T-359.
- Y318 (≠ F290) mutation to F: Increases affinity for D-sorbitol.
- A359 (= A331) mutation to T: Alters cofactor specificity from NAD to NADP; when associated with 213-SR-214.
B6HI95 L-arabinitol 4-dehydrogenase; LAD; EC 1.1.1.12 from Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) (Penicillium chrysogenum) (see paper)
33% identity, 93% coverage: 24:341/343 of query aligns to 41:369/385 of B6HI95
- DI 212:213 (≠ DL 200:201) mutation to SR: Alters cofactor specificity from NAD to NADP; when associated with T-358.
- S358 (≠ A331) mutation to T: Alters cofactor specificity from NAD to NADP; when associated with 212-SR-213.
4ej6A Crystal structure of a putative zinc-binding dehydrogenase (target psi-012003) from sinorhizobium meliloti 1021
31% identity, 94% coverage: 1:323/343 of query aligns to 4:323/343 of 4ej6A
- active site: C40 (= C37), G41 (= G38), T42 (≠ S39), H45 (= H42), H61 (= H62), E62 (= E63), C91 (= C92), C94 (= C95), C97 (= C98), C105 (= C106), R109 (= R110), P147 (= P153), C151 (= C157)
- binding zinc ion: C91 (= C92), C94 (= C95), C97 (= C98), C105 (= C106)
Sites not aligning to the query:
P07913 L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli (strain K12) (see paper)
31% identity, 94% coverage: 23:343/343 of query aligns to 24:340/341 of P07913
- C38 (= C37) mutation to D: Shows only 1% of wild-type catalytic activity. This mutant can be stimulated to the wild-type activity level after incubation with Zn(+).; mutation to S: Loss of catalytic activity. This mutant cannot be stimulated to the wild-type activity level after incubation with Zn(+).
4ejmA Crystal structure of a putative zinc-binding dehydrogenase (target psi-012003) from sinorhizobium meliloti 1021 bound to NADP
31% identity, 94% coverage: 1:323/343 of query aligns to 4:323/342 of 4ejmA