SitesBLAST
Comparing WP_091526195.1 NCBI__GCF_900115115.1:WP_091526195.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7qh2C Cryo-em structure of ldh-etfab complex from acetobacterium woodii (see paper)
38% identity, 96% coverage: 12:461/467 of query aligns to 16:463/467 of 7qh2C
- binding flavin-adenine dinucleotide: V73 (≠ P69), G75 (= G71), S76 (≠ A72), G77 (≠ R73), T78 (= T74), G79 (= G75), L80 (= L76), A83 (≠ G79), C84 (≠ I80), P137 (= P133), G138 (≠ S134), E139 (≠ S135), A142 (≠ C139), T143 (≠ F140), G146 (= G143), N147 (= N144), S149 (≠ A146), T150 (≠ E147), A152 (= A149), G153 (= G150), E203 (= E200), G204 (= G201), I209 (≠ V206), E422 (= E420), H423 (= H421)
- binding fe (iii) ion: H377 (= H375), H384 (= H382), E422 (= E420)
P9WIT1 Uncharacterized FAD-linked oxidoreductase Rv2280; EC 1.-.-.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
36% identity, 99% coverage: 4:465/467 of query aligns to 2:459/459 of P9WIT1
- K354 (= K354) modified: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup)
8jdvA Crystal structure of mldhd in complex with 2-ketohexanoic acid (see paper)
30% identity, 99% coverage: 2:462/467 of query aligns to 1:454/454 of 8jdvA
- binding 2-Ketohexanoic acid: V75 (≠ L76), R317 (= R327), W321 (vs. gap), H368 (= H375), H375 (= H382), H413 (= H421)
- binding flavin-adenine dinucleotide: P68 (= P69), G70 (= G71), T71 (≠ A72), G72 (≠ R73), T73 (= T74), G74 (= G75), G78 (= G79), V79 (≠ I80), L90 (= L91), P132 (= P133), G133 (≠ S134), A134 (≠ S135), G140 (= G143), M141 (≠ N144), A143 (= A146), T144 (≠ E147), A146 (= A149), S147 (≠ G150), E200 (= E200), G201 (= G201), I206 (≠ V206), W321 (vs. gap), Y322 (vs. gap), E412 (= E420), H413 (= H421), N449 (= N457)
- binding manganese (ii) ion: H368 (= H375), H375 (= H382), E412 (= E420)
8jdsA Crystal structure of mldhd in complex with pyruvate (see paper)
30% identity, 99% coverage: 2:462/467 of query aligns to 1:456/456 of 8jdsA
- binding flavin-adenine dinucleotide: E32 (≠ H33), P68 (= P69), G70 (= G71), T71 (≠ A72), G72 (≠ R73), T73 (= T74), G74 (= G75), G78 (= G79), V79 (≠ I80), L90 (= L91), P132 (= P133), G133 (≠ S134), A134 (≠ S135), G140 (= G143), M141 (≠ N144), A143 (= A146), T144 (≠ E147), A146 (= A149), S147 (≠ G150), E200 (= E200), G201 (= G201), I206 (≠ V206), W323 (vs. gap), E414 (= E420), H415 (= H421), N451 (= N457)
- binding manganese (ii) ion: H370 (= H375), H377 (= H382), E414 (= E420)
- binding pyruvic acid: R319 (= R327), H370 (= H375), H377 (= H382), H415 (= H421)
8jduA Crystal structure of mldhd in complex with 2-ketovaleric acid (see paper)
30% identity, 99% coverage: 2:462/467 of query aligns to 1:455/455 of 8jduA
- binding 2-oxopentanoic acid: R318 (= R327), W322 (vs. gap), H369 (= H375), H376 (= H382), H414 (= H421)
- binding flavin-adenine dinucleotide: P68 (= P69), G70 (= G71), T71 (≠ A72), G72 (≠ R73), T73 (= T74), G74 (= G75), G78 (= G79), V79 (≠ I80), L90 (= L91), P132 (= P133), G133 (≠ S134), A134 (≠ S135), G140 (= G143), M141 (≠ N144), A143 (= A146), T144 (≠ E147), A146 (= A149), S147 (≠ G150), E200 (= E200), G201 (= G201), I206 (≠ V206), W322 (vs. gap), E413 (= E420), N450 (= N457)
- binding manganese (ii) ion: H369 (= H375), H376 (= H382), E413 (= E420)
8jdxA Crystal structure of mldhd in complex with 2-ketoisovaleric acid (see paper)
30% identity, 99% coverage: 2:462/467 of query aligns to 1:455/455 of 8jdxA
- binding flavin-adenine dinucleotide: E32 (≠ H33), P68 (= P69), G70 (= G71), T71 (≠ A72), G72 (≠ R73), T73 (= T74), G74 (= G75), G78 (= G79), V79 (≠ I80), L90 (= L91), P132 (= P133), G133 (≠ S134), A134 (≠ S135), G140 (= G143), M141 (≠ N144), A143 (= A146), T144 (≠ E147), A146 (= A149), S147 (≠ G150), E200 (= E200), G201 (= G201), I206 (≠ V206), W322 (vs. gap), E413 (= E420), H414 (= H421), N450 (= N457)
- binding 3-methyl-2-oxobutanoic acid: R318 (= R327), H369 (= H375), H376 (= H382), H414 (= H421)
- binding manganese (ii) ion: H369 (= H375), H376 (= H382), E413 (= E420)
6lpxA Crystal structure of human d-2-hydroxyglutarate dehydrogenase in complex with 2-oxoglutarate (2-og) (see paper)
31% identity, 96% coverage: 19:464/467 of query aligns to 25:466/466 of 6lpxA
- binding 2-oxoglutaric acid: R333 (= R327), T337 (≠ A331), K348 (≠ E342), Y379 (= Y373), H381 (= H375), H388 (= H382), H423 (= H421)
- binding flavin-adenine dinucleotide: W39 (≠ H33), P75 (= P69), Q76 (≠ I70), G77 (= G71), G78 (≠ A72), N79 (≠ R73), T80 (= T74), G81 (= G75), M82 (≠ L76), G85 (= G79), S86 (≠ I80), L139 (≠ P133), G140 (≠ S134), A141 (≠ S135), C145 (= C139), G149 (= G143), N150 (= N144), A152 (= A146), T153 (≠ E147), G157 (= G151), G207 (= G201), I212 (≠ V206), E422 (= E420), N459 (= N457)
- binding zinc ion: H381 (= H375), H388 (= H382), E422 (= E420)
6lpuA Crystal structure of human d-2-hydroxyglutarate dehydrogenase in complex with l-2-hydroxyglutarate (l-2-hg) (see paper)
31% identity, 96% coverage: 19:464/467 of query aligns to 25:466/466 of 6lpuA
- binding flavin-adenine dinucleotide: W39 (≠ H33), P75 (= P69), G77 (= G71), G78 (≠ A72), N79 (≠ R73), T80 (= T74), G81 (= G75), G85 (= G79), S86 (≠ I80), L139 (≠ P133), G140 (≠ S134), A141 (≠ S135), C145 (= C139), H146 (≠ F140), G148 (= G142), G149 (= G143), N150 (= N144), A152 (= A146), T153 (≠ E147), A155 (= A149), E206 (= E200), G207 (= G201), I211 (≠ V205), I212 (≠ V206), E422 (= E420), N459 (= N457)
- binding (2s)-2-hydroxypentanedioic acid: R333 (= R327), T337 (≠ A331), K348 (≠ E342), Y379 (= Y373), H381 (= H375), H388 (= H382), H423 (= H421)
- binding zinc ion: H381 (= H375), H388 (= H382), E422 (= E420)
6lpqA Crystal structure of human d-2-hydroxyglutarate dehydrogenase in complex with d-malate (d-mal) (see paper)
31% identity, 96% coverage: 19:464/467 of query aligns to 25:466/466 of 6lpqA
- binding flavin-adenine dinucleotide: W39 (≠ H33), P75 (= P69), G77 (= G71), G78 (≠ A72), N79 (≠ R73), T80 (= T74), G81 (= G75), G85 (= G79), S86 (≠ I80), L139 (≠ P133), G140 (≠ S134), A141 (≠ S135), C145 (= C139), H146 (≠ F140), G149 (= G143), N150 (= N144), A152 (= A146), T153 (≠ E147), A155 (= A149), G157 (= G151), E206 (= E200), G207 (= G201), I211 (≠ V205), I212 (≠ V206), E422 (= E420), N459 (= N457)
- binding d-malate: M82 (≠ L76), R333 (= R327), T337 (≠ A331), K348 (≠ E342), Y379 (= Y373), H381 (= H375), H388 (= H382), E422 (= E420), H423 (= H421)
- binding zinc ion: H381 (= H375), H388 (= H382), E422 (= E420)
6lppA Crystal structure of human d-2-hydroxyglutarate dehydrogenase in complex with d-2-hydroxyglutarate (d-2-hg) (see paper)
31% identity, 96% coverage: 19:464/467 of query aligns to 25:466/466 of 6lppA