SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_092052742.1 NCBI__GCF_900111775.1:WP_092052742.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

2f06A Crystal structure of protein bt0572 from bacteroides thetaiotaomicron
43% identity, 100% coverage: 1:143/143 of query aligns to 4:144/144 of 2f06A

query
sites
2f06A
M
 
M
K
 
V
V
 
A
E
 
K
Q
 
Q
I
 
L
S
 
S
I
 
I
F
 
F
I
 
L
E
 
E
N
 
N
K
 
K
S
 
S
G
 
G
R
 
R
L
 
L
A
 
T
E
 
E
V
 
V
T
 
T
R
 
E
V
 
V
L
 
L
G
 
A
E
 
K
A
 
E
G
 
N
V
 
I
N
 
N
I
 
L
R
 
S
A
 
A
L
 
L
S
 
C
L
 
I
A
 
A
D
 
E
T
 
N
S
 
A
D
 
D
F
 
F
G
 
G
I
 
I
L
 
L
R
 
R
L
 
G
I
 
I
V
 
V
N
 
S
K
 
D
T
 
P
D
 
D
E
 
K
A
 
A
K
 
Y
A
 
K
V
 
A
L
 
L
K
 
K
S
 
D
K
 
N
G
 
H
F
 
F
T
 
A
V
 
V
N
 
N
K
 
I
T
 
T
D
 
D
V
 
V
V
 
V
A
 
G
V
 
I
E
 
S
V
 
C
P
|
P
D
 
N
R
x
V
P
 
P
L
 
G
G
 
A
L
|
L
N
 
A
S
 
K
I
 
V
L
 
L
E
 
G
I
 
F
L
 
L
D
 
S
Q
 
A
G
 
E
K
 
G
V
 
V
N
 
F
V
 
I
E
 
E
Y
 
Y
M
 
M
Y
 
Y
A
 
S
F
 
F
V
 
A
E
 
N
R
 
N
C
 
N
G
 
V
E
x
A
N
 
N
A
 
V
V
 
V
I
 
I
I
 
-
F
 
-
R
 
R
F
 
P
D
 
S
N
 
N
T
 
M
D
 
D
D
 
K
A
 
C
I
 
I
Q
 
E
V
 
V
L
 
L
T
 
K
Q
 
E
G
 
K
G
 
K
I
 
V
T
 
D
I
 
L
L
 
L
T
 
A
G
 
A
E
 
S
R
 
D
I
 
L
Y
 
Y
N
 
K
M
 
L

Query Sequence

>WP_092052742.1 NCBI__GCF_900111775.1:WP_092052742.1
MKVEQISIFIENKSGRLAEVTRVLGEAGVNIRALSLADTSDFGILRLIVNKTDEAKAVLK
SKGFTVNKTDVVAVEVPDRPLGLNSILEILDQGKVNVEYMYAFVERCGENAVIIFRFDNT
DDAIQVLTQGGITILTGERIYNM

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory