SitesBLAST
Comparing WP_092481519.1 NCBI__GCF_900115975.1:WP_092481519.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
3du4A Crystal structure of 7-keto-8-aminopelargonic acid bound 7,8- diaminopelargonic acid synthase in bacillus subtilis (see paper)
53% identity, 97% coverage: 14:456/457 of query aligns to 10:447/448 of 3du4A
- active site: F17 (= F21), Y146 (= Y154), E217 (= E226), D251 (= D260), A254 (= A263), K280 (= K289), A417 (≠ V426)
- binding 7-keto-8-aminopelargonic acid: L82 (= L87), Y146 (= Y154), G315 (= G324), S317 (≠ T326), R410 (= R419)
- binding pyridoxal-5'-phosphate: S112 (= S117), G113 (= G118), A114 (≠ S119), Y146 (= Y154), H147 (= H155), E217 (= E226), D251 (= D260), V253 (= V262), A254 (= A263), K280 (= K289), H316 (= H325), S317 (≠ T326)
P53555 L-Lysine--8-amino-7-oxononanoate transaminase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; L-Lysine--8-amino-7-oxononanoate aminotransferase; EC 2.6.1.105 from Bacillus subtilis (strain 168) (see paper)
53% identity, 97% coverage: 14:456/457 of query aligns to 10:447/448 of P53555
- GA 113:114 (≠ GS 118:119) binding pyridoxal 5'-phosphate
- Y146 (= Y154) binding substrate
- K280 (= K289) modified: N6-(pyridoxal phosphate)lysine
- G315 (= G324) binding substrate
- HS 316:317 (≠ HT 325:326) binding pyridoxal 5'-phosphate
- R410 (= R419) binding substrate
6zhkA Crystal structure of adenosylmethionine-8-amino-7-oxononanoate aminotransferase from methanocaldococcus jannaschii dsm 2661
53% identity, 97% coverage: 9:451/457 of query aligns to 5:435/438 of 6zhkA
6wnnA Bacillus subtilis bioa in complex with amino donor l-lys
49% identity, 97% coverage: 14:456/457 of query aligns to 7:419/420 of 6wnnA
- active site: F14 (= F21), Y143 (= Y154), D223 (= D260), K252 (= K289)
- binding (2S)-2-amino-6-[[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]hexanoic acid: F14 (= F21), W51 (= W59), S109 (= S117), G110 (= G118), A111 (≠ S119), Y143 (= Y154), H144 (= H155), D223 (= D260), V225 (= V262), K252 (= K289), R382 (= R419)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: H288 (= H325), S289 (≠ T326)
3dodA Crystal structure of plp bound 7,8-diaminopelargonic acid synthase in bacillus subtilis (see paper)
49% identity, 97% coverage: 14:456/457 of query aligns to 8:416/417 of 3dodA
- active site: F15 (= F21), E186 (= E226), D220 (= D260), A223 (= A263), K249 (= K289), A386 (≠ V426)
- binding pyridoxal-5'-phosphate: W52 (= W59), S110 (= S117), G111 (= G118), A112 (≠ S119), D220 (= D260), V222 (= V262), K249 (= K289), H285 (= H325), S286 (≠ T326)
5lh9D Amine transaminase crystal structure from an uncultivated pseudomonas species in the plp-bound (internal aldimine) form
38% identity, 94% coverage: 7:437/457 of query aligns to 3:433/449 of 5lh9D
- active site: Y148 (= Y154), D255 (= D260), K284 (= K289), T321 (= T326)
- binding pyridoxal-5'-phosphate: G115 (= G118), S116 (= S119), Y148 (= Y154), H149 (= H155), G150 (= G156), E222 (= E226), D255 (= D260), V257 (= V262), K284 (= K289)
5lhaA Amine transaminase crystal structure from an uncultivated pseudomonas species in the pmp-bound form
38% identity, 94% coverage: 7:437/457 of query aligns to 1:431/447 of 5lhaA
- active site: Y146 (= Y154), D253 (= D260), K282 (= K289), T319 (= T326)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G113 (= G118), S114 (= S119), Y146 (= Y154), H147 (= H155), G148 (= G156), E220 (= E226), D253 (= D260), K282 (= K289), Y318 (≠ H325), T319 (= T326)
6io1B Crystal structure of a novel thermostable (s)-enantioselective omega- transaminase from thermomicrobium roseum (see paper)
37% identity, 95% coverage: 19:454/457 of query aligns to 18:448/448 of 6io1B
- active site: L20 (≠ F21), Y151 (= Y154), D257 (= D260), K286 (= K289)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G117 (≠ S117), G118 (= G118), A119 (≠ S119), N122 (≠ V122), Y151 (= Y154), H152 (= H155), D257 (= D260), V259 (= V262), I260 (≠ A263), K286 (= K289)
6s54A Transaminase from pseudomonas fluorescens (see paper)
36% identity, 95% coverage: 12:444/457 of query aligns to 7:443/453 of 6s54A
- active site: M20 (≠ F21), Y152 (= Y154), D258 (= D260), K287 (= K289)
- binding pyridoxal-5'-phosphate: G119 (= G118), S120 (= S119), Y152 (= Y154), H153 (= H155), G154 (= G156), E225 (= E226), D258 (= D260), V260 (= V262), I261 (≠ A263), K287 (= K289)
6fyqA The crystal structure of a new transaminase from the marine bacterium virgibacillus (see paper)
35% identity, 98% coverage: 9:454/457 of query aligns to 3:440/443 of 6fyqA
- active site: F15 (= F21), Y147 (= Y154), D243 (= D260), K272 (= K289)
- binding pyridoxal-5'-phosphate: G114 (= G118), S115 (= S119), Y147 (= Y154), H148 (= H155), G149 (= G156), E210 (= E226), D243 (= D260), V245 (= V262), I246 (≠ A263), K272 (= K289)
P12995 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Escherichia coli (strain K12) (see 4 papers)
38% identity, 97% coverage: 13:456/457 of query aligns to 9:424/429 of P12995
- Y17 (≠ F21) mutation to F: Severely reduces the aminotransferase activity.
- W52 (≠ L58) binding substrate
- GS 112:113 (= GS 118:119) binding pyridoxal 5'-phosphate
- Y144 (= Y154) mutation to F: Severely reduces the aminotransferase activity.
- D147 (= D157) mutation to N: Loss of aminotransferase activity.
- D245 (= D260) binding pyridoxal 5'-phosphate
- R253 (= R268) mutation to A: Has only a small effect on the rate of reaction with DAPA.; mutation to K: Increases aminotransferase activity toward SAM.; mutation to M: Loss of aminotransferase activity.; mutation to Q: Increases aminotransferase activity toward SAM.
- K274 (= K289) binding substrate; modified: N6-(pyridoxal phosphate)lysine
- G307 (= G324) binding substrate
- PT 308:309 (≠ HT 325:326) binding pyridoxal 5'-phosphate
- R391 (= R419) binding substrate; mutation to A: Reduces aminotransferase activity.
6ed7A Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor mac13772
38% identity, 97% coverage: 13:456/457 of query aligns to 9:424/429 of 6ed7A
- active site: Y17 (≠ F21), Y144 (= Y154), D245 (= D260), K274 (= K289)
- binding 2-[(2-nitrophenyl)sulfanyl]acetohydrazide: Y17 (≠ F21), W52 (≠ L58), W52 (≠ L58), Y144 (= Y154), D147 (= D157), A217 (= A232), K274 (= K289), R391 (= R419), F393 (≠ L421), F393 (≠ L421)
- binding pyridoxal-5'-phosphate: G112 (= G118), S113 (= S119), Y144 (= Y154), H145 (= H155), D245 (= D260), I247 (≠ V262), K274 (= K289)
4cxqA Mycobaterium tuberculosis transaminase bioa complexed with substrate kapa (see paper)
36% identity, 96% coverage: 4:441/457 of query aligns to 1:414/427 of 4cxqA
- active site: Y18 (≠ F21), Y149 (= Y154), E212 (= E226), D246 (= D260), A249 (= A263), K275 (= K289), Y399 (≠ V426)
- binding 7-keto-8-aminopelargonic acid: W56 (≠ L58), Y149 (= Y154), G308 (= G324), T310 (= T326), R392 (= R419)
- binding pyridoxal-5'-phosphate: G116 (= G118), S117 (= S119), Y149 (= Y154), H150 (= H155), G151 (= G156), E212 (= E226), D246 (= D260), I248 (≠ V262), K275 (= K289), P309 (≠ H325), T310 (= T326)
1dtyA Crystal structure of adenosylmethionine-8-amino-7-oxonanoate aminotransferase with pyridoxal phosphate cofactor.
38% identity, 97% coverage: 13:456/457 of query aligns to 9:424/429 of 1dtyA
- active site: Y17 (≠ F21), Y144 (= Y154), E211 (= E226), D245 (= D260), A248 (= A263), K274 (= K289), Y398 (≠ V426)
- binding pyridoxal-5'-phosphate: G112 (= G118), S113 (= S119), Y144 (= Y154), H145 (= H155), D245 (= D260), I247 (≠ V262), K274 (= K289)
6erkA Crystal structure of diaminopelargonic acid aminotransferase from psychrobacter cryohalolentis (see paper)
36% identity, 96% coverage: 12:452/457 of query aligns to 9:412/420 of 6erkA
1mlzA Crystal structure of 7,8-diaminopelargonic acid synthase in complex with the trans-isomer of amiclenomycin. (see paper)
37% identity, 97% coverage: 12:456/457 of query aligns to 8:423/427 of 1mlzA
- active site: Y17 (≠ F21), Y144 (= Y154), E210 (= E226), D244 (= D260), A247 (= A263), K273 (= K289), Y397 (≠ V426)
- binding pyridoxal-5'-phosphate: G112 (= G118), S113 (= S119), Y144 (= Y154), H145 (= H155), D244 (= D260), I246 (≠ V262), K273 (= K289), P307 (≠ H325), T308 (= T326)
- binding trans-amiclenomycin: W52 (≠ L58), W53 (= W59), Y144 (= Y154), K273 (= K289), R390 (= R419), F392 (≠ L421)
1mlyA Crystal structure of 7,8-diaminopelargonic acid synthase in complex with the cis isomer of amiclenomycin (see paper)
37% identity, 97% coverage: 12:456/457 of query aligns to 8:423/427 of 1mlyA
- active site: Y17 (≠ F21), Y144 (= Y154), E210 (= E226), D244 (= D260), A247 (= A263), K273 (= K289), Y397 (≠ V426)
- binding cis-amiclenomycin: W52 (≠ L58), W53 (= W59), K273 (= K289), R390 (= R419), F392 (≠ L421)
- binding pyridoxal-5'-phosphate: G112 (= G118), S113 (= S119), Y144 (= Y154), H145 (= H155), D244 (= D260), I246 (≠ V262), K273 (= K289), P307 (≠ H325), T308 (= T326)
4w1vA Crystal structure of 7,8-diaminopelargonic acid synthase (bioa) from mycobacterium tuberculosis, complexed with a thiazole inhibitor (see paper)
35% identity, 96% coverage: 4:441/457 of query aligns to 1:412/425 of 4w1vA
- active site: Y18 (≠ F21), Y147 (= Y154), E210 (= E226), D244 (= D260), A247 (= A263), K273 (= K289), Y397 (≠ V426)
- binding dimethyl (2R)-5-(3-fluorophenyl)-1H-pyrrolo[1,2-c][1,3]thiazole-6,7-dicarboxylate 2-oxide: P17 (= P20), Y18 (≠ F21), W54 (≠ L58), M81 (≠ T85), G83 (≠ L87), Y147 (= Y154), G306 (= G324), P307 (≠ H325), T308 (= T326), F392 (≠ L421)
- binding pyridoxal-5'-phosphate: G114 (= G118), S115 (= S119), Y147 (= Y154), H148 (= H155), E210 (= E226), D244 (= D260), I246 (≠ V262), K273 (= K289)
4cxrA Mycobaterium tuberculosis transaminase bioa complexed with 1-(1,3- benzothiazol-2-yl)methanamine (see paper)
35% identity, 96% coverage: 4:441/457 of query aligns to 1:412/425 of 4cxrA
- active site: Y18 (≠ F21), Y147 (= Y154), E210 (= E226), D244 (= D260), A247 (= A263), K273 (= K289), Y397 (≠ V426)
- binding 1-(1,3-benzothiazol-2-yl)methanamine: Y18 (≠ F21), W54 (≠ L58), W55 (= W59), A216 (= A232)
- binding pyridoxal-5'-phosphate: G114 (= G118), S115 (= S119), Y147 (= Y154), H148 (= H155), E210 (= E226), D244 (= D260), I246 (≠ V262), K273 (= K289), P307 (≠ H325), T308 (= T326)
4wydA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase from mycobacterium tuberculosis complexed with a fragment from dsf screening (see paper)
36% identity, 96% coverage: 4:441/457 of query aligns to 1:415/430 of 4wydA
- active site: Y18 (≠ F21), Y150 (= Y154), E213 (= E226), D247 (= D260), A250 (= A263), K276 (= K289), Y400 (≠ V426)
- binding N-methyl-1-[4-(1H-pyrazol-1-ylmethyl)phenyl]methanamine: Y18 (≠ F21), W57 (≠ L58), W58 (= W59), Y150 (= Y154), A219 (= A232), G309 (= G324), T311 (= T326), F395 (≠ L421)
- binding pyridoxal-5'-phosphate: G117 (= G118), S118 (= S119), Y150 (= Y154), H151 (= H155), E213 (= E226), D247 (= D260), I249 (≠ V262), K276 (= K289), P310 (≠ H325), T311 (= T326)
Query Sequence
>WP_092481519.1 NCBI__GCF_900115975.1:WP_092481519.1
MDILQPEQLEHWDKEYVWHPFTQMREYRKEKPLIVERGEGSYLFDVEGNKYLDGISSLWV
TVHGHGKEAINRAIIEQLDKVAHSTLLGEANIPSILLAKKLVEITPPGLDYVFYSESGST
AVEIALKIAYQYWQQQGDEKYKSKRKFVSLVNAYHGDTIGSVSVGGIDLFHKIFSHLLFE
TLSVPAPYCYRCPLDLSKDTCSMQCVGEMEILLARHHREIAGVIVEPLVQGAAGMIVAPE
GYLGKVRELCTKYNILLIADEVAVGFGRTGKLFACEHENVKPDLMCLAKGITGGYLPLAA
TMATGEIYNAFLGGIEECKTFYHGHTYTGNPLGCAAALANLELFEKDKLIETLEEKISFL
THGLERFKELKHVGDVRQKGMMVGIELVENKETKEPFPVRANIPHRVILEARKNGLIIRP
LGNVIVLMPILSMSLSELKDVLDITCAAIKKVTEGEA
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory