SitesBLAST
Comparing WP_092482325.1 NCBI__GCF_900115975.1:WP_092482325.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8wpiA Anabaena mcyi with prebound NAD and soaked NADP
37% identity, 98% coverage: 4:328/330 of query aligns to 1:318/318 of 8wpiA
- binding nicotinamide-adenine-dinucleotide: V99 (= V100), G146 (= G156), G148 (= G158), R149 (≠ K159), I150 (= I160), Y169 (= Y179), D170 (= D180), P171 (≠ A181), Y172 (= Y182), H202 (= H212), P203 (≠ V213), E204 (≠ P214), E208 (≠ G218), T209 (= T219), T230 (≠ S240), S231 (≠ A241), R232 (= R242), H280 (= H290)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: Y9 (≠ H12), Y48 (vs. gap), S69 (≠ H70), G70 (= G71), F71 (≠ M72), G72 (= G73), L110 (= L111), K113 (≠ R114), F116 (≠ E117), F226 (= F236), R232 (= R242), D273 (= D283), N274 (= N284), V284 (≠ M294), T285 (= T295), G289 (≠ L299)
8wprA Anabaena mcyi r166a with prebound NAD and malate
36% identity, 98% coverage: 4:328/330 of query aligns to 3:320/320 of 8wprA
- binding nicotinamide-adenine-dinucleotide: S97 (≠ N96), V101 (= V100), G150 (= G158), A151 (≠ K159), I152 (= I160), Y171 (= Y179), D172 (= D180), P173 (≠ A181), Y174 (= Y182), P205 (≠ V213), E206 (≠ P214), E210 (≠ G218), T211 (= T219), T232 (≠ S240), S233 (≠ A241), R234 (= R242), H282 (= H290), G285 (≠ A293)
5aovA Ternary crystal structure of pyrococcus furiosus glyoxylate hydroxypyruvate reductase in presence of glyoxylate (see paper)
40% identity, 100% coverage: 1:330/330 of query aligns to 1:328/334 of 5aovA
- active site: L100 (≠ N96), R241 (= R242), D265 (= D266), E270 (= E271), H288 (= H290)
- binding glyoxylic acid: M52 (≠ R49), L53 (vs. gap), L53 (vs. gap), Y74 (≠ H70), A75 (≠ G71), V76 (≠ M72), G77 (= G73), R241 (= R242), H288 (= H290)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: V76 (≠ M72), T104 (≠ V100), F158 (≠ V157), G159 (= G158), R160 (≠ K159), I161 (= I160), S180 (≠ D180), R181 (≠ A181), A211 (≠ H212), V212 (= V213), P213 (= P214), T218 (= T219), I239 (≠ S240), A240 (= A241), R241 (= R242), H288 (= H290), G290 (≠ A292)
O43175 D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens (Human) (see 3 papers)
35% identity, 98% coverage: 3:326/330 of query aligns to 7:319/533 of O43175
- T78 (≠ M72) binding NAD(+)
- R135 (= R129) to W: in PHGDHD; results in a 2-fold decrease in enzyme activity with 3-phosphohydroxypyruvate, but no change in substrate affinity; dbSNP:rs267606949
- RI 155:156 (≠ KI 159:160) binding NAD(+)
- D175 (= D180) binding NAD(+)
- T207 (≠ V213) binding NAD(+)
- CAR 234:236 (≠ SAR 240:242) binding NAD(+)
- D260 (= D266) binding NAD(+)
- V261 (= V267) to M: in PHGDHD; results in a four-fold decrease in substrate affinity and a slight increase in maximal enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs267606947
- HLGA 283:286 (≠ HIAA 290:293) binding NAD(+)
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 2 modified: N-acetylalanine
- 373 A → T: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs201553627
- 377 G → S: in PHGDHD; results in a 2-fold decrease in enzyme activity with 3-phosphohydroxypyruvate, but no change in substrate affinity; dbSNP:rs267606948
- 425 V → M: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs121907988
- 490 V → M: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs121907987
1wwkA Crystal structure of phosphoglycerate dehydrogenase from pyrococcus horikoshii ot3
40% identity, 95% coverage: 4:316/330 of query aligns to 2:304/304 of 1wwkA
- active site: S96 (≠ N96), R230 (= R242), D254 (= D266), E259 (= E271), H278 (= H290)
- binding nicotinamide-adenine-dinucleotide: V100 (= V100), G146 (= G156), F147 (≠ V157), G148 (= G158), R149 (≠ K159), I150 (= I160), Y168 (= Y179), D169 (= D180), P170 (≠ A181), V201 (= V213), P202 (= P214), T207 (= T219), T228 (≠ S240), S229 (≠ A241), D254 (= D266), H278 (= H290), G280 (≠ A292)
6plfA Crystal structure of human phgdh complexed with compound 1 (see paper)
35% identity, 95% coverage: 3:316/330 of query aligns to 3:305/305 of 6plfA
7dkmA Phgdh covalently linked to oridonin (see paper)
35% identity, 95% coverage: 3:317/330 of query aligns to 3:306/306 of 7dkmA
- binding nicotinamide-adenine-dinucleotide: T74 (≠ M72), A102 (≠ V100), G148 (= G156), R151 (≠ K159), I152 (= I160), Y170 (= Y179), D171 (= D180), P172 (≠ A181), I173 (≠ Y182), H202 (= H212), T203 (≠ V213), P204 (= P214), T209 (= T219), C230 (≠ S240), A231 (= A241), R232 (= R242), H279 (= H290), G281 (≠ A292)
- binding (1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one: C14 (≠ E14), K17 (≠ N17), I18 (= I18), E293 (≠ R304)
6rj3A Crystal structure of phgdh in complex with compound 15 (see paper)
36% identity, 92% coverage: 3:307/330 of query aligns to 1:294/297 of 6rj3A
6plgA Crystal structure of human phgdh complexed with compound 15 (see paper)
35% identity, 95% coverage: 3:315/330 of query aligns to 2:303/303 of 6plgA
6cwaA Crystal structure phgdh in complex with nadh and 3-phosphoglycerate at 1.77 a resolution (see paper)
36% identity, 92% coverage: 3:307/330 of query aligns to 1:294/299 of 6cwaA
- binding 1,4-dihydronicotinamide adenine dinucleotide: N96 (= N96), A100 (≠ V100), R149 (≠ K159), I150 (= I160), Y168 (= Y179), D169 (= D180), P170 (≠ A181), I171 (≠ Y182), H200 (= H212), T201 (≠ V213), P202 (= P214), T207 (= T219), C228 (≠ S240), A229 (= A241), R230 (= R242), H277 (= H290), G279 (≠ A292)
7ewhA Crystal structure of human phgdh in complex with homoharringtonine (see paper)
36% identity, 92% coverage: 3:307/330 of query aligns to 2:295/302 of 7ewhA
- binding (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine: L146 (≠ V155), G147 (= G156), L148 (≠ V157), G149 (= G158), R150 (≠ K159), I151 (= I160), G152 (≠ A161), D170 (= D180), H201 (= H212), T202 (≠ V213), P203 (= P214)
6rihA Crystal structure of phgdh in complex with compound 9 (see paper)
36% identity, 92% coverage: 3:307/330 of query aligns to 2:295/302 of 6rihA
6rj5A Crystal structure of phgdh in complex with compound 39 (see paper)
36% identity, 92% coverage: 3:307/330 of query aligns to 2:295/301 of 6rj5A
6rj2A Crystal structure of phgdh in complex with compound 40 (see paper)
38% identity, 83% coverage: 33:307/330 of query aligns to 30:292/299 of 6rj2A