Comparing WP_092483295.1 NCBI__GCF_900115975.1:WP_092483295.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
8y4wA Sialic acid bound form of tripartite atp-independent periplasmic (trap) transporter from fusobacterium nucleatum.
37% identity, 96% coverage: 7:419/429 of query aligns to 196:608/612 of 8y4wA
8b01B Cryo-em structure of the tripartite atp-independent periplasmic (trap) transporter siaqm from photobacterium profundum in a nanodisc (see paper)
40% identity, 95% coverage: 14:419/429 of query aligns to 11:416/427 of 8b01B
>WP_092483295.1 NCBI__GCF_900115975.1:WP_092483295.1
MTVALILLLVLLLLLLVGFPIAFSLAMAAVAALLSKGTIPLTVVPQRLFTATDSFILLAV
PFFVLAGELMQHGGISRRLVNFASDLLGWISGGLALVSIASAAFFAAISGSSAATTAAIG
GVMYPEMRQRGYKPDFTAVVQAVGGTLGVVIPPSIPLIIYGVITGASIGDLFLAGIIPGL
LGAAVYMAVAWKMAGKLGYKTMQRSSLKKTWHSFREASWGLLMPVIILGGIYGGVFTPTE
AAVVAVVYALLVGFFIYKELNWKNFYSMLVKSGLTSAMIMLLIATASLFTWIMTIENIPQ
AITGAILSMTESKLVFLLLVNMVFLIAGMFLDTVAIILLLIPIFFPIALQLGVDPVHFGV
IAVFNLAVGQMTPPFGVCLFVSSGVSGVSLEKLFKAVLPYLLAAFILILLLTYVPSLSLG
ILELFAKSI
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory