Comparing WP_092483976.1 NCBI__GCF_900115975.1:WP_092483976.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8j5qD Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- translocation state (see paper)
42% identity, 98% coverage: 2:314/319 of query aligns to 3:316/611 of 8j5qD
Sites not aligning to the query:
8j5tD Cryo-em structure of mycobacterium tuberculosis oppabcd in the catalytic intermediate state (see paper)
42% identity, 98% coverage: 2:314/319 of query aligns to 3:316/608 of 8j5tD
Sites not aligning to the query:
8j5sD Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- catalytic intermediate state (see paper)
42% identity, 98% coverage: 2:314/319 of query aligns to 3:316/608 of 8j5sD
Sites not aligning to the query:
P0AAH4 Putrescine export system ATP-binding protein SapD from Escherichia coli (strain K12) (see paper)
36% identity, 98% coverage: 2:314/319 of query aligns to 3:321/330 of P0AAH4
8xfcD Cryo-em structure of the atp-bound mtb dppabcd with the d445a mutation of dppa
41% identity, 80% coverage: 2:257/319 of query aligns to 4:254/517 of 8xfcD
Sites not aligning to the query:
8wdbD Cryo-em structure of the atp-bound dppabcd complex
41% identity, 80% coverage: 2:257/319 of query aligns to 3:253/513 of 8wdbD
Sites not aligning to the query:
Q8RDH4 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis) (see paper)
34% identity, 98% coverage: 1:314/319 of query aligns to 3:316/326 of Q8RDH4
4fwiB Crystal structure of the nucleotide-binding domain of a dipeptide abc transporter (see paper)
35% identity, 98% coverage: 1:314/319 of query aligns to 2:305/310 of 4fwiB
Sites not aligning to the query:
3c4jA Abc protein artp in complex with atp-gamma-s
35% identity, 79% coverage: 2:253/319 of query aligns to 3:238/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
35% identity, 79% coverage: 2:253/319 of query aligns to 3:238/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
35% identity, 79% coverage: 2:253/319 of query aligns to 3:238/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
35% identity, 79% coverage: 2:253/319 of query aligns to 3:238/242 of 2oljA
7z15I E. Coli c-p lyase bound to a phnk/phnl dual abc dimer and adp + pi (see paper)
36% identity, 73% coverage: 25:256/319 of query aligns to 22:247/253 of 7z15I
Sites not aligning to the query:
7z18I E. Coli c-p lyase bound to a phnk abc dimer and atp (see paper)
36% identity, 73% coverage: 25:256/319 of query aligns to 22:247/250 of 7z18I
Sites not aligning to the query:
7z16I E. Coli c-p lyase bound to phnk/phnl dual abc dimer with amppnp and phnk e171q mutation (see paper)
35% identity, 73% coverage: 25:256/319 of query aligns to 22:247/250 of 7z16I
Sites not aligning to the query:
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
36% identity, 76% coverage: 11:253/319 of query aligns to 7:236/241 of 4u00A
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
36% identity, 76% coverage: 12:253/319 of query aligns to 8:236/240 of 4ymuJ