Comparing WP_093392840.1 NCBI__GCF_900114975.1:WP_093392840.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
5odcD Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus at 2.3 a resolution (see paper)
52% identity, 92% coverage: 3:133/143 of query aligns to 1:131/138 of 5odcD
7bkbF Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) (see paper)
48% identity, 91% coverage: 3:132/143 of query aligns to 1:130/137 of 7bkbF
>WP_093392840.1 NCBI__GCF_900114975.1:WP_093392840.1
MSDWQPKIIAFLCNWCSYGAADLAGVSRFKQPPFIRIIRVPCSGRMNPKFIIQALRKGAD
GVWVSGCHPGDCHYIAGNYYARRKFALLKNLLEYVGIEPERIHFSWISSAEATKFAKVAE
EVVEAVKSVGPARRLVKREAEVE
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory