Comparing WP_093396481.1 NCBI__GCF_900114975.1:WP_093396481.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2d3tC Fatty acid beta-oxidation multienzyme complex from pseudomonas fragi, form v (see paper)
43% identity, 98% coverage: 7:395/397 of query aligns to 6:390/390 of 2d3tC
8jg2A Crystal structure of a biosynthetic thiolase from megasphaera hexanoica soaked with hexanoyl-coa
38% identity, 97% coverage: 5:390/397 of query aligns to 2:387/393 of 8jg2A
6pccA Crystal structure of beta-ketoadipyl-coa thiolase mutant (h356a) in complex hexanoyl coenzyme a (see paper)
41% identity, 98% coverage: 5:395/397 of query aligns to 4:403/403 of 6pccA
6pcbA Crystal structure of beta-ketoadipyl-coa thiolase mutant (h356a) in complex with coa (see paper)
41% identity, 98% coverage: 5:395/397 of query aligns to 4:403/403 of 6pcbA
8gqmA Crystal structure of thiolase complexed with acetyl coenzyme a
42% identity, 97% coverage: 7:393/397 of query aligns to 2:373/377 of 8gqmA
5f38B X-ray crystal structure of a thiolase from escherichia coli at 1.8 a resolution (see paper)
40% identity, 98% coverage: 5:395/397 of query aligns to 1:391/391 of 5f38B
6pcdA Crystal structure of beta-ketoadipyl-coa thiolase mutant (c90s-h356a) in complex octanoyl coenzyme a (see paper)
40% identity, 98% coverage: 5:395/397 of query aligns to 5:401/401 of 6pcdA
5f38D X-ray crystal structure of a thiolase from escherichia coli at 1.8 a resolution (see paper)
39% identity, 98% coverage: 5:393/397 of query aligns to 3:393/394 of 5f38D
Q56WD9 3-ketoacyl-CoA thiolase 2, peroxisomal; Acetyl-CoA acyltransferase 2; Beta-ketothiolase 2; Peroxisomal 3-oxoacyl-CoA thiolase 2; Peroxisome defective protein 1; EC 2.3.1.16 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
38% identity, 98% coverage: 6:393/397 of query aligns to 50:437/462 of Q56WD9
P45359 Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; CaTHL; EC 2.3.1.9 from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W) (see paper)
37% identity, 98% coverage: 5:393/397 of query aligns to 1:390/392 of P45359
4xl4A Crystal structure of thiolase from clostridium acetobutylicum in complex with coa (see paper)
37% identity, 98% coverage: 5:393/397 of query aligns to 1:390/392 of 4xl4A
8oqmD Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-10
38% identity, 99% coverage: 4:395/397 of query aligns to 1:399/399 of 8oqmD
8oqlC Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-1
38% identity, 98% coverage: 6:395/397 of query aligns to 2:397/397 of 8oqlC
8opyD Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-b-dnq
37% identity, 99% coverage: 4:395/397 of query aligns to 1:401/401 of 8opyD
8oqoC Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-49
38% identity, 98% coverage: 6:395/397 of query aligns to 2:398/398 of 8oqoC
7o4tD Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme with coenzyme a bound at the hydratase, thiolase active sites and possible additional binding site (coa(ech/had)) (see paper)
37% identity, 99% coverage: 4:395/397 of query aligns to 1:403/403 of 7o4tD
O53871 Putative acyltransferase Rv0859; EC 2.3.1.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
37% identity, 99% coverage: 4:395/397 of query aligns to 1:403/403 of O53871
P09110 3-ketoacyl-CoA thiolase, peroxisomal; Acetyl-CoA C-myristoyltransferase; Acetyl-CoA acyltransferase; Beta-ketothiolase; Peroxisomal 3-oxoacyl-CoA thiolase; EC 2.3.1.16; EC 2.3.1.155; EC 2.3.1.9 from Homo sapiens (Human) (see 3 papers)
38% identity, 97% coverage: 7:393/397 of query aligns to 37:420/424 of P09110
Sites not aligning to the query:
P07097 Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Shinella zoogloeoides (Crabtreella saccharophila) (see 2 papers)
38% identity, 97% coverage: 9:395/397 of query aligns to 6:392/392 of P07097
8pf8C Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-72
37% identity, 98% coverage: 6:395/397 of query aligns to 2:402/402 of 8pf8C
>WP_093396481.1 NCBI__GCF_900114975.1:WP_093396481.1
MSRMLEEVVVVDSIRTPFGRAGEKGIFWKTRAEDLAVAVFKALLERNPSLDLSTIDDSIW
GVTNQVREQGGTLGRMVPILAYGEKGWGIPGCSIDRMCASSLTAVGFGAAMIASGMAECI
IAGGVEHMGHLPMGFMRDLHPRAAEALGDETALVMGQTAENIHDRFPEFTREMADMYAFM
SQQKAAKAIRAGKMRDMMVPVEVELPDGTKALIREDQTPRPDTTLEKLASLKPAFRENGR
VTAGNACPLTDGAAAVLIMSESRARKLGLTPKMRFVTCAVAGVDPRIMGTAPVPATQKAL
AKAGLKMDDIDVIEINEAFAVQVLYCLDRLGLTADDPRVNMWGGAIAYGHPLAASGARLI
AFLQRIFEEHPEYRYGITTLCVGRGQGYTVIWENLLR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory