SitesBLAST
Comparing WP_094509170.1 NCBI__GCF_002252445.1:WP_094509170.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4yweA Crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia
60% identity, 98% coverage: 13:486/486 of query aligns to 2:476/476 of 4yweA
4pz2B Structure of zm aldh2-6 (rf2f) in complex with NAD (see paper)
44% identity, 97% coverage: 9:481/486 of query aligns to 8:484/494 of 4pz2B
- active site: N159 (= N158), K182 (= K181), E258 (= E256), C292 (= C290), E392 (= E388), D469 (≠ E466)
- binding nicotinamide-adenine-dinucleotide: I155 (= I154), I156 (= I155), P157 (= P156), W158 (= W157), N159 (= N158), M164 (≠ I163), K182 (= K181), A184 (= A183), E185 (= E184), G215 (= G214), G219 (= G218), F233 (= F232), T234 (= T233), G235 (= G234), S236 (= S235), V239 (≠ T238), E258 (= E256), L259 (= L257), C292 (= C290), E392 (= E388), F394 (= F390)
4pxlA Structure of zm aldh2-3 (rf2c) in complex with NAD (see paper)
44% identity, 97% coverage: 12:481/486 of query aligns to 6:476/486 of 4pxlA
- active site: N154 (= N158), K177 (= K181), E253 (= E256), C287 (= C290), E384 (= E388), D461 (≠ E466)
- binding nicotinamide-adenine-dinucleotide: I150 (= I154), V151 (≠ I155), P152 (= P156), W153 (= W157), K177 (= K181), E180 (= E184), G210 (= G214), G214 (= G218), A215 (= A219), F228 (= F232), G230 (= G234), S231 (= S235), V234 (≠ T238), E253 (= E256), G255 (= G258), C287 (= C290), Q334 (= Q336), K337 (≠ I339), E384 (= E388), F386 (= F390)
5gtlA NADPH complex structure of aldehyde dehydrogenase from bacillus cereus
41% identity, 97% coverage: 13:484/486 of query aligns to 18:489/491 of 5gtlA
- active site: N165 (= N158), K188 (= K181), E263 (= E256), C297 (= C290), E394 (= E388), E471 (= E466)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: I161 (= I154), P163 (= P156), K188 (= K181), A190 (= A183), E191 (= E184), Q192 (≠ D185), G221 (= G214), G225 (= G218), G241 (= G234), S242 (= S235), T245 (= T238), L264 (= L257), C297 (= C290), E394 (= E388), F396 (= F390)
5gtkA NAD+ complex structure of aldehyde dehydrogenase from bacillus cereus
41% identity, 97% coverage: 13:484/486 of query aligns to 18:489/491 of 5gtkA
- active site: N165 (= N158), K188 (= K181), E263 (= E256), C297 (= C290), E394 (= E388), E471 (= E466)
- binding nicotinamide-adenine-dinucleotide: I161 (= I154), I162 (= I155), P163 (= P156), W164 (= W157), K188 (= K181), E191 (= E184), G221 (= G214), G225 (= G218), A226 (= A219), F239 (= F232), G241 (= G234), S242 (= S235), T245 (= T238), Y248 (≠ R241), L264 (= L257), C297 (= C290), Q344 (= Q336), R347 (≠ I339), E394 (= E388), F396 (= F390)
6tgwA Crystal structure of human aldehyde dehydrogenase 1a3 in complex with a selective inhibitor (see paper)
41% identity, 98% coverage: 9:484/486 of query aligns to 3:477/478 of 6tgwA
- active site: N155 (= N158), E254 (= E256), C288 (= C290), E459 (= E466)
- binding methyl 5-(1,3-benzodioxol-5-yl)-2-phenyl-pyrazolo[1,5-a]pyrimidine-7-carboxylate: I106 (≠ N109), G110 (≠ A113), F156 (≠ Y159), Q278 (≠ G280), F282 (≠ Q284), L442 (≠ G448), A444 (≠ G450)
- binding nicotinamide-adenine-dinucleotide: I151 (= I154), T152 (≠ I155), P153 (= P156), W154 (= W157), K178 (= K181), G211 (= G214), G215 (= G218), F229 (= F232), G231 (= G234), S232 (= S235), V235 (≠ T238)
7qk9A Crystal structure of the aldh1a3-atp complex (see paper)
41% identity, 98% coverage: 9:486/486 of query aligns to 10:489/489 of 7qk9A
- binding adenosine-5'-triphosphate: I158 (= I154), T159 (≠ I155), P160 (= P156), W161 (= W157), K185 (= K181), E188 (= E184), G218 (= G214), G222 (= G218), F236 (= F232), S239 (= S235), V242 (≠ T238)
4o6rA Crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia
41% identity, 97% coverage: 12:484/486 of query aligns to 4:478/489 of 4o6rA
- active site: N150 (= N158), K173 (= K181), E248 (= E256), C282 (= C290), E383 (= E388), E460 (= E466)
- binding adenosine monophosphate: I146 (= I154), V147 (≠ I155), K173 (= K181), G206 (= G214), G210 (= G218), Q211 (≠ A219), F224 (= F232), G226 (= G234), S227 (= S235), T230 (= T238), R233 (= R241)
P47895 Retinaldehyde dehydrogenase 3; RALDH-3; RalDH3; Aldehyde dehydrogenase 6; Aldehyde dehydrogenase family 1 member A3; ALDH1A3; EC 1.2.1.36 from Homo sapiens (Human) (see 2 papers)
41% identity, 98% coverage: 9:486/486 of query aligns to 29:508/512 of P47895
- R89 (≠ G67) to C: in MCOP8; does not affect ALDH1A3 expression; results in strongly reduced protein levels; dbSNP:rs397514652
- K204 (= K181) binding NAD(+)
- E207 (= E184) binding NAD(+)
- GSTEVG 257:262 (≠ GSVATG 234:239) binding NAD(+)
- Q361 (= Q336) binding NAD(+)
- E411 (= E388) binding NAD(+)
- A493 (= A471) to P: in MCOP8; does not affect ALDH1A3 expression; results in strongly reduced protein levels; dbSNP:rs397514653
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 2 modified: N-acetylalanine
7a6qB Crystal structure of human aldehyde dehydrogenase 1a3 in complex with selective nr6 inhibitor compound (see paper)
41% identity, 98% coverage: 9:484/486 of query aligns to 11:488/489 of 7a6qB
- active site: N163 (= N158), E262 (= E256), C296 (= C290), E470 (= E466)
- binding nicotinamide-adenine-dinucleotide: I159 (= I154), W162 (= W157), K186 (= K181), E189 (= E184), G219 (= G214), G223 (= G218), S240 (= S235), V243 (≠ T238), K342 (= K335)
- binding (3-oxidanylidene-3-sodiooxy-propanoyl)oxysodium: A32 (≠ P30), T33 (≠ V31), C34 (≠ E32), P36 (= P34), D103 (= D99), E189 (= E184), Q190 (≠ D185), F218 (≠ Y213), I339 (≠ V332), D340 (≠ S333)
- binding 3-(2-phenylimidazo[1,2-a]pyridin-6-yl)benzenecarbonitrile: G118 (≠ A113), D141 (≠ Q136), N143 (≠ G138), N451 (≠ G446), L453 (≠ G448), A455 (≠ G450)
7a6qA Crystal structure of human aldehyde dehydrogenase 1a3 in complex with selective nr6 inhibitor compound (see paper)
41% identity, 98% coverage: 9:484/486 of query aligns to 11:488/489 of 7a6qA
- active site: N163 (= N158), E262 (= E256), C296 (= C290), E470 (= E466)
- binding nicotinamide-adenine-dinucleotide: I159 (= I154), T160 (≠ I155), W162 (= W157), K186 (= K181), A188 (= A183), E189 (= E184), G219 (= G214), G223 (= G218), S240 (= S235), V243 (≠ T238), K342 (= K335), K346 (≠ I339)
- binding 3-(2-phenylimidazo[1,2-a]pyridin-6-yl)benzenecarbonitrile: G118 (≠ A113), D141 (≠ Q136), N143 (≠ G138), N451 (≠ G446), L453 (≠ G448), Y454 (≠ G449)
5fhzA Human aldehyde dehydrogenase 1a3 complexed with NAD(+) and retinoic acid (see paper)
41% identity, 98% coverage: 9:484/486 of query aligns to 11:488/489 of 5fhzA
- active site: N163 (= N158), K186 (= K181), E262 (= E256), C296 (= C290), E393 (= E388), E470 (= E466)
- binding nicotinamide-adenine-dinucleotide: I159 (= I154), T160 (≠ I155), W162 (= W157), K186 (= K181), E189 (= E184), G219 (= G214), G223 (= G218), F237 (= F232), G239 (= G234), S240 (= S235), T241 (≠ V236), V243 (≠ T238), G264 (= G258), Q343 (= Q336), E393 (= E388)
- binding retinoic acid: G118 (≠ A113), R121 (= R116), F164 (≠ Y159), M168 (≠ I163), W171 (≠ R166), C295 (≠ T289), C296 (= C290), L453 (≠ G448)
Q56YU0 Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
41% identity, 99% coverage: 5:483/486 of query aligns to 13:493/501 of Q56YU0
- G152 (≠ V141) mutation to E: In ref1-7; reduced activity on sinapaldehyde.
- G416 (≠ A405) mutation to R: In ref1-6; reduced activity on sinapaldehyde.
6tryA Crystal structure of human aldehyde dehydrogenase 1a3 in complex with mf13 inhibitor compound (see paper)
41% identity, 98% coverage: 9:486/486 of query aligns to 4:478/478 of 6tryA
- active site: N156 (= N158), E255 (= E256), C289 (= C290), E458 (= E466)
- binding nicotinamide-adenine-dinucleotide: I152 (= I154), T153 (≠ I155), W155 (= W157), K179 (= K181), A181 (= A183), E182 (= E184), G212 (= G214), G216 (= G218), A217 (= A219), F230 (= F232), G232 (= G234), S233 (= S235), V236 (≠ T238), K335 (= K335)
- binding 8-(4-chlorophenyl)-2-phenyl-imidazo[1,2-a]pyridine: I107 (≠ N109), G111 (≠ A113), T115 (≠ Y117), L160 (≠ Q162), C288 (≠ T289), L441 (≠ G448), A443 (≠ G450)
6te5B Crystal structure of human aldehyde dehydrogenase 1a3 in complex with lq43 inhibitor compound (see paper)
41% identity, 98% coverage: 9:486/486 of query aligns to 5:479/479 of 6te5B
- active site: N157 (= N158), E256 (= E256), C290 (= C290), E459 (= E466)
- binding 6-(3,5-dimethoxyphenyl)-2-(4-methoxyphenyl)imidazo[1,2-a]pyridine: E111 (≠ I112), G112 (≠ A113), T116 (≠ Y117), L442 (≠ G448), A444 (≠ G450)
- binding nicotinamide-adenine-dinucleotide: I153 (= I154), T154 (≠ I155), W156 (= W157), K180 (= K181), E183 (= E184), G213 (= G214), F231 (= F232), S234 (= S235), V237 (≠ T238), Q337 (= Q336), K340 (≠ I339)
O94788 Retinal dehydrogenase 2; RALDH 2; RalDH2; Aldehyde dehydrogenase family 1 member A2; ALDH1A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II); EC 1.2.1.36 from Homo sapiens (Human) (see 6 papers)
41% identity, 98% coverage: 9:484/486 of query aligns to 35:512/518 of O94788
- E50 (≠ T24) to G: in dbSNP:rs34266719
- A110 (≠ S82) to V: in dbSNP:rs35365164
- Q182 (≠ I153) to K: in DIH4; decreased retinoic acid biosynthetic process
- IPW 184:186 (= IPW 155:157) binding NAD(+)
- KPAE 210:213 (= KPAE 181:184) binding NAD(+)
- STE 264:266 (≠ SVA 235:237) binding NAD(+)
- C320 (= C290) active site, Nucleophile
- R347 (≠ L317) to H: in DIH4; decreased expression; dbSNP:rs141245344
- V348 (≠ T318) to I: in dbSNP:rs4646626
- KQYNK 366:370 (≠ KQHQI 335:339) binding NAD(+)
- A383 (vs. gap) to T: in DIH4; uncertain significance; dbSNP:rs749124508
- E417 (= E388) binding NAD(+)
- E436 (≠ K407) to K: in dbSNP:rs34744827
- S461 (≠ A432) to Y: in DIH4; decreased retinoic acid biosynthetic process
6b5hA Aldh1a2 liganded with NAD and 1-(4-cyanophenyl)-n-(3-fluorophenyl)-3- [4-(methylsulfonyl)phenyl]-1h-pyrazole-4-carboxamide (compound cm121) (see paper)
41% identity, 98% coverage: 9:484/486 of query aligns to 9:486/492 of 6b5hA
- active site: N161 (= N158), E260 (= E256), C294 (= C290), E468 (= E466)
- binding 1-(4-cyanophenyl)-N-(3-fluorophenyl)-3-[4-(methylsulfonyl)phenyl]-1H-pyrazole-4-carboxamide: V112 (vs. gap), G116 (≠ A113), F162 (≠ Y159), W169 (≠ R166), Q284 (≠ G280), F288 (≠ Q284), T295 (≠ S291), N449 (≠ G446), L451 (≠ G448), N452 (≠ G449), F457 (= F455)
- binding nicotinamide-adenine-dinucleotide: I157 (= I154), I158 (= I155), W160 (= W157), N161 (= N158), K184 (= K181), G217 (= G214), G221 (= G218), F235 (= F232), T236 (= T233), G237 (= G234), S238 (= S235), V241 (≠ T238), E260 (= E256), L261 (= L257), C294 (= C290), F393 (= F390)
6b5gA Aldh1a2 liganded with NAD and (3-ethoxythiophen-2-yl){4-[4-nitro-3- (pyrrolidin-1-yl)phenyl]piperazin-1-yl}methanone (compound 6-118) (see paper)
41% identity, 98% coverage: 9:484/486 of query aligns to 9:486/492 of 6b5gA
- active site: N161 (= N158), E260 (= E256), C294 (= C290), E468 (= E466)
- binding (3-ethoxythiophen-2-yl){4-[4-nitro-3-(pyrrolidin-1-yl)phenyl]piperazin-1-yl}methanone: F162 (≠ Y159), L165 (≠ Q162), W169 (≠ R166), F288 (≠ Q284), C293 (≠ T289), C294 (= C290), T295 (≠ S291), N449 (≠ G446), L451 (≠ G448)
- binding nicotinamide-adenine-dinucleotide: I157 (= I154), I158 (= I155), P159 (= P156), W160 (= W157), N161 (= N158), M166 (≠ I163), K184 (= K181), E187 (= E184), G217 (= G214), G221 (= G218), F235 (= F232), T236 (= T233), G237 (= G234), S238 (= S235), V241 (≠ T238), E260 (= E256), L261 (= L257), C294 (= C290), E391 (= E388), F393 (= F390)
6aljA Aldh1a2 liganded with NAD and compound win18,446 (see paper)
41% identity, 98% coverage: 9:484/486 of query aligns to 9:486/492 of 6aljA
- active site: N161 (= N158), E260 (= E256), C294 (= C290), E468 (= E466)
- binding N,N'-(octane-1,8-diyl)bis(2,2-dichloroacetamide): G116 (≠ A113), F162 (≠ Y159), L165 (≠ Q162), M166 (≠ I163), W169 (≠ R166), E260 (= E256), C293 (≠ T289), C294 (= C290), L451 (≠ G448), N452 (≠ G449), A453 (≠ G450)
- binding nicotinamide-adenine-dinucleotide: I157 (= I154), I158 (= I155), P159 (= P156), W160 (= W157), N161 (= N158), K184 (= K181), E187 (= E184), G217 (= G214), G221 (= G218), F235 (= F232), G237 (= G234), S238 (= S235), V241 (≠ T238), Q341 (= Q336), K344 (≠ I339), E391 (= E388), F393 (= F390)
Q63639 Retinal dehydrogenase 2; RALDH 2; RalDH2; Aldehyde dehydrogenase family 1 member A2; ALDH1A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II); EC 1.2.1.36 from Rattus norvegicus (Rat) (see paper)
41% identity, 98% coverage: 9:484/486 of query aligns to 35:512/518 of Q63639
Query Sequence
>WP_094509170.1 NCBI__GCF_002252445.1:WP_094509170.1
MTLDQLMWIDTTKVFLNGQWITPTGGKTIPVENPSTGDVIGQIGRGTEAEIDTAVVAARA
ALNGEWGRLTATQRGRILMKMSELVLERAEELAMIETLDVGKPLNQSRNDAIALARYLEF
YAGAADKLMGTTIPYQEGFTVYTLREAHGVCGIIIPWNYPIQILGRGVGAALAAGNTVVV
KPAEDASLSSLAVAAIAAEAGVPAGVINVVTGYGHDVGAHLSSHPGINHISFTGSVATGV
RIQEAAAKNVVPVTLELGGKSPHIVFDDVDLEKAMPILVGACMQNAGQTCSAASRVLVQK
GIYDEVKRRMIAIYKGLTVGPAIDSLSLGPVVSKKQHQIVQGFIDRGRAELTMAAQGNLH
PEAPAGGNYVLPTLFSEVSPDHTLAQQEIFGPVQVLIPFEDEEEALKIANGTDYGLVTGI
WTRDGARQLRMARKISSGQVFINNYGAGGGIELPFGGVGKSGHGREKGFEALNGFTHIKT
VTISHG
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory