SitesBLAST
Comparing WP_101446326.1 NCBI__GCF_002846395.1:WP_101446326.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7qh2C Cryo-em structure of ldh-etfab complex from acetobacterium woodii (see paper)
27% identity, 51% coverage: 31:508/941 of query aligns to 39:460/467 of 7qh2C
- binding flavin-adenine dinucleotide: V73 (≠ F65), G75 (≠ T67), S76 (≠ A68), G77 (= G69), T78 (= T70), G79 (≠ S71), L80 (= L72), A83 (≠ Q75), C84 (≠ S76), P137 (= P127), G138 (≠ A128), E139 (≠ S129), A142 (= A133), T143 (≠ M134), G146 (= G137), N147 (≠ I138), S149 (= S140), T150 (≠ N141), A152 (= A143), G153 (≠ S144), E203 (= E245), G204 (= G246), I209 (= I251), E422 (= E470), H423 (= H471)
- binding fe (iii) ion: H377 (= H425), H384 (= H432), E422 (= E470)
8jduA Crystal structure of mldhd in complex with 2-ketovaleric acid (see paper)
22% identity, 51% coverage: 37:512/941 of query aligns to 40:455/455 of 8jduA
- binding 2-oxopentanoic acid: R318 (= R372), W322 (≠ F376), H369 (= H425), H376 (= H432), H414 (= H471)
- binding flavin-adenine dinucleotide: P68 (vs. gap), G70 (≠ F65), T71 (≠ R66), G72 (≠ T67), T73 (≠ A68), G74 (= G69), G78 (≠ S73), V79 (≠ G74), L90 (= L85), P132 (= P127), G133 (≠ A128), A134 (≠ S129), G140 (= G137), M141 (≠ I138), A143 (≠ S140), T144 (≠ N141), A146 (= A143), S147 (= S144), E200 (= E245), G201 (= G246), I206 (= I251), W322 (≠ F376), E413 (= E470), N450 (= N507)
- binding manganese (ii) ion: H369 (= H425), H376 (= H432), E413 (= E470)
8jdxA Crystal structure of mldhd in complex with 2-ketoisovaleric acid (see paper)
22% identity, 51% coverage: 37:512/941 of query aligns to 40:455/455 of 8jdxA
- binding flavin-adenine dinucleotide: P68 (vs. gap), G70 (≠ F65), T71 (≠ R66), G72 (≠ T67), T73 (≠ A68), G74 (= G69), G78 (≠ S73), V79 (≠ G74), L90 (= L85), P132 (= P127), G133 (≠ A128), A134 (≠ S129), G140 (= G137), M141 (≠ I138), A143 (≠ S140), T144 (≠ N141), A146 (= A143), S147 (= S144), E200 (= E245), G201 (= G246), I206 (= I251), W322 (≠ F376), E413 (= E470), H414 (= H471), N450 (= N507)
- binding 3-methyl-2-oxobutanoic acid: R318 (= R372), H369 (= H425), H376 (= H432), H414 (= H471)
- binding manganese (ii) ion: H369 (= H425), H376 (= H432), E413 (= E470)
Sites not aligning to the query:
8jdsA Crystal structure of mldhd in complex with pyruvate (see paper)
22% identity, 51% coverage: 37:512/941 of query aligns to 40:456/456 of 8jdsA
- binding flavin-adenine dinucleotide: P68 (vs. gap), G70 (≠ F65), T71 (≠ R66), G72 (≠ T67), T73 (≠ A68), G74 (= G69), G78 (≠ S73), V79 (≠ G74), L90 (= L85), P132 (= P127), G133 (≠ A128), A134 (≠ S129), G140 (= G137), M141 (≠ I138), A143 (≠ S140), T144 (≠ N141), A146 (= A143), S147 (= S144), E200 (= E245), G201 (= G246), I206 (= I251), W323 (≠ F376), E414 (= E470), H415 (= H471), N451 (= N507)
- binding manganese (ii) ion: H370 (= H425), H377 (= H432), E414 (= E470)
- binding pyruvic acid: R319 (= R372), H370 (= H425), H377 (= H432), H415 (= H471)
Sites not aligning to the query:
8jdeA Crystal structure of mldhd in complex with d-lactate (see paper)
22% identity, 51% coverage: 37:512/941 of query aligns to 40:455/455 of 8jdeA
- binding flavin-adenine dinucleotide: P68 (vs. gap), G70 (≠ F65), T71 (≠ R66), G72 (≠ T67), T73 (≠ A68), G74 (= G69), G78 (≠ S73), V79 (≠ G74), L90 (= L85), P132 (= P127), G133 (≠ A128), A134 (≠ S129), G140 (= G137), M141 (≠ I138), A143 (≠ S140), T144 (≠ N141), A146 (= A143), S147 (= S144), E200 (= E245), G201 (= G246), I206 (= I251), W322 (≠ F376), E413 (= E470), H414 (= H471), N450 (= N507)
- binding lactic acid: R318 (= R372), H369 (= H425), H376 (= H432), H414 (= H471)
- binding manganese (ii) ion: H369 (= H425), H376 (= H432), E413 (= E470)
8jdvA Crystal structure of mldhd in complex with 2-ketohexanoic acid (see paper)
22% identity, 51% coverage: 37:512/941 of query aligns to 40:454/454 of 8jdvA
- binding 2-Ketohexanoic acid: V75 (≠ T70), R317 (= R372), W321 (≠ F376), H368 (= H425), H375 (= H432), H413 (= H471)
- binding flavin-adenine dinucleotide: P68 (vs. gap), G70 (≠ F65), T71 (≠ R66), G72 (≠ T67), T73 (≠ A68), G74 (= G69), G78 (≠ S73), V79 (≠ G74), L90 (= L85), P132 (= P127), G133 (≠ A128), A134 (≠ S129), G140 (= G137), M141 (≠ I138), A143 (≠ S140), T144 (≠ N141), A146 (= A143), S147 (= S144), E200 (= E245), G201 (= G246), I206 (= I251), W321 (≠ F376), Y322 (≠ P377), E412 (= E470), H413 (= H471), N449 (= N507)
- binding manganese (ii) ion: H368 (= H425), H375 (= H432), E412 (= E470)
8jdtA Crystal structure of mldhd in complex with 2-ketobutanoic acid (see paper)
23% identity, 51% coverage: 37:512/941 of query aligns to 40:455/455 of 8jdtA
- binding 2-ketobutyric acid: R318 (= R372), H369 (= H425), H376 (= H432), H414 (= H471)
- binding flavin-adenine dinucleotide: P68 (vs. gap), G70 (≠ F65), T71 (≠ R66), G72 (≠ T67), T73 (≠ A68), G74 (= G69), G78 (≠ S73), V79 (≠ G74), L90 (= L85), P132 (= P127), G133 (≠ A128), A134 (≠ S129), G140 (= G137), M141 (≠ I138), A143 (≠ S140), T144 (≠ N141), A146 (= A143), S147 (= S144), E200 (= E245), G201 (= G246), I206 (= I251), W322 (≠ F376), E413 (= E470), H414 (= H471), N450 (= N507)
- binding manganese (ii) ion: H369 (= H425), H376 (= H432), E413 (= E470)
8jdzA Crystal structure of mldhd in complex with 2-keto-3-methylvaleric acid (see paper)
22% identity, 51% coverage: 37:512/941 of query aligns to 40:454/454 of 8jdzA
- binding (3S)-3-methyl-2-oxopentanoic acid: R318 (= R372), W322 (≠ F376), H369 (= H425), H376 (= H432), H413 (= H471)
- binding flavin-adenine dinucleotide: P68 (vs. gap), G70 (≠ F65), T71 (≠ R66), G72 (≠ T67), T73 (≠ A68), G74 (= G69), G78 (≠ S73), V79 (≠ G74), L90 (= L85), P132 (= P127), G133 (≠ A128), A134 (≠ S129), G140 (= G137), M141 (≠ I138), A143 (≠ S140), T144 (≠ N141), A146 (= A143), S147 (= S144), E200 (= E245), G201 (= G246), I206 (= I251), W322 (≠ F376), E412 (= E470), H413 (= H471), N449 (= N507)
- binding manganese (ii) ion: H369 (= H425), H376 (= H432), E412 (= E470)
Sites not aligning to the query:
8jdyA Crystal structure of mldhd in complex with 2-ketoisocaproic acid (see paper)
22% identity, 51% coverage: 37:512/941 of query aligns to 40:454/454 of 8jdyA