SitesBLAST
Comparing WP_106710215.1 NCBI__GCF_003010955.1:WP_106710215.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1kv9A Structure at 1.9 a resolution of a quinohemoprotein alcohol dehydrogenase from pseudomonas putida hk5 (see paper)
28% identity, 76% coverage: 164:758/778 of query aligns to 16:521/664 of 1kv9A
- active site: E173 (≠ N349), N250 (= N416), D295 (= D460)
- binding acetone: E173 (≠ N349), D295 (= D460)
- binding calcium ion: E173 (≠ N349), N250 (= N416), D295 (= D460)
- binding heme c: A101 (≠ D257), R102 (= R258)
- binding pyrroloquinoline quinone: E59 (≠ Q215), C105 (≠ T262), C106 (= C263), R111 (= R264), T155 (= T330), G170 (≠ A345), A172 (≠ D348), E173 (≠ N349), T230 (≠ N396), W232 (= W398), K322 (= K487), N382 (= N584), W383 (= W585), W460 (≠ V691)
Sites not aligning to the query:
- binding heme c: 590, 591, 594, 595, 605, 606, 608, 611, 615, 619, 623, 631, 633, 636
- binding pyrroloquinoline quinone: 525
Q8GR64 Quinohemoprotein alcohol dehydrogenase ADH IIB; ADH IIB; Alcohol dehydrogenase (azurin); EC 1.1.9.1 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 3 papers)
28% identity, 76% coverage: 164:758/778 of query aligns to 38:543/690 of Q8GR64
- E81 (≠ Q215) binding pyrroloquinoline quinone
- C127 (≠ T262) modified: Disulfide link with 128
- C128 (= C263) modified: Disulfide link with 127
- R133 (= R264) binding pyrroloquinoline quinone
- T177 (= T330) binding pyrroloquinoline quinone
- GA 193:194 (≠ ND 347:348) binding pyrroloquinoline quinone
- E195 (≠ N349) binding Ca(2+)
- T252 (≠ N396) binding pyrroloquinoline quinone
- N272 (= N416) binding Ca(2+)
- D317 (= D460) binding Ca(2+)
- K344 (= K487) binding pyrroloquinoline quinone
- NW 404:405 (= NW 584:585) binding pyrroloquinoline quinone
Sites not aligning to the query:
- 1:22 signal peptide
- 23:690 modified: mature protein, Quinohemoprotein alcohol dehydrogenase ADH IIB
- 547 binding pyrroloquinoline quinone
- 613 binding covalent
- 616 binding covalent
- 617 binding axial binding residue
- 655 binding axial binding residue
O05542 Alcohol dehydrogenase (quinone), dehydrogenase subunit; ADH; Alcohol dehydrogenase (quinone), acceptor subunit; Alcohol dehydrogenase (quinone), subunit I; Ethanol:Q2 reductase; G3-ADH subunit I; Quinohemoprotein alcohol dehydrogenase; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5 from Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans) (see paper)
26% identity, 76% coverage: 164:758/778 of query aligns to 52:584/757 of O05542
Sites not aligning to the query:
- 1:34 signal peptide
- 35 modified: Pyrrolidone carboxylic acid
8gy2A Cryo-em structure of membrane-bound alcohol dehydrogenase from gluconobacter oxydans
26% identity, 76% coverage: 164:758/778 of query aligns to 18:550/723 of 8gy2A
- binding calcium ion: E181 (≠ D348), N263 (= N416), D308 (= D460)
- binding heme c: D104 (= D257)
- binding pyrroloquinoline quinone: C107 (vs. gap), C108 (vs. gap), D163 (≠ T330), G179 (≠ V346), A180 (≠ N347), E181 (≠ D348), W245 (vs. gap), N263 (= N416), D308 (= D460), K335 (= K487), F398 (≠ W585), W489 (vs. gap)
Sites not aligning to the query:
- binding heme c: 618, 619, 622, 623, 633, 634, 636, 639, 652, 660, 662, 665
Q4W6G0 Quinohemoprotein alcohol dehydrogenase ADH-IIG; ADH IIG; Alcohol dehydrogenase (azurin); EC 1.1.9.1 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
29% identity, 49% coverage: 116:500/778 of query aligns to 10:369/718 of Q4W6G0
- C138 (= C263) modified: Disulfide link with 139
- C139 (vs. gap) modified: Disulfide link with 138
- R144 (= R264) binding pyrroloquinoline quinone
- T189 (= T330) binding pyrroloquinoline quinone
- GA 205:206 (≠ ND 347:348) binding pyrroloquinoline quinone
- E207 (≠ N349) binding Ca(2+)
- T264 (≠ N396) binding pyrroloquinoline quinone
- N284 (= N416) binding Ca(2+)
- D329 (= D460) binding Ca(2+)
- K356 (= K487) binding pyrroloquinoline quinone
Sites not aligning to the query:
- 1:29 signal peptide
- 30:718 modified: mature protein, Quinohemoprotein alcohol dehydrogenase ADH-IIG
- 415 binding substrate
- 419:420 binding pyrroloquinoline quinone
- 635 binding covalent
- 638 binding covalent
- 639 binding axial binding residue
- 676 binding axial binding residue
7o6zB Structure of a neodymium-containing, xoxf1-type methanol dehydrogenase (see paper)
25% identity, 77% coverage: 165:764/778 of query aligns to 13:547/588 of 7o6zB