Comparing WP_106711955.1 NCBI__GCF_003010955.1:WP_106711955.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
O31645 PTS system mannose-specific EIIBCA component; EIIBCA-Man; EII-Man; EC 2.7.1.191 from Bacillus subtilis (strain 168) (see 2 papers)
27% identity, 97% coverage: 2:145/149 of query aligns to 501:646/650 of O31645
Sites not aligning to the query:
P46321 Probable licABCH operon regulator; EC 2.7.1.- from Bacillus subtilis (strain 168) (see paper)
26% identity, 94% coverage: 6:145/149 of query aligns to 500:635/641 of P46321
Sites not aligning to the query:
>WP_106711955.1 NCBI__GCF_003010955.1:WP_106711955.1
MKLADYIAPEGVLFDLDASSKTEALQLMSAGLSKPSGLPVDAILTALQKRENLGSTGVGQ
GIAIPHTRIDGIEKPIGLLARMRKPIDFESIDDLPVDIIFVLLTPNRDTNKHLNVLAAFS
RKLRSPGALKQMRTAKDAQSLYTLFVSLP
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory