Comparing WP_106712778.1 NCBI__GCF_003010955.1:WP_106712778.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
39% identity, 96% coverage: 7:493/505 of query aligns to 4:488/501 of P04983
3c4jA Abc protein artp in complex with atp-gamma-s
32% identity, 41% coverage: 15:221/505 of query aligns to 11:216/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
32% identity, 41% coverage: 15:221/505 of query aligns to 11:216/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
32% identity, 41% coverage: 15:221/505 of query aligns to 11:216/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
32% identity, 41% coverage: 15:221/505 of query aligns to 11:216/242 of 2oljA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
31% identity, 43% coverage: 7:221/505 of query aligns to 2:214/241 of 4u00A
8k1pB Mycobacterial efflux pump, adp+vanadate bound state
33% identity, 42% coverage: 11:224/505 of query aligns to 7:210/213 of 8k1pB
8k1oB Mycobacterial efflux pump, amppnp bound state
33% identity, 42% coverage: 11:224/505 of query aligns to 9:212/215 of 8k1oB
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
34% identity, 43% coverage: 20:235/505 of query aligns to 18:236/343 of P30750
Sites not aligning to the query:
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
33% identity, 43% coverage: 20:235/505 of query aligns to 19:237/344 of 6cvlD
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
33% identity, 43% coverage: 20:235/505 of query aligns to 19:237/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
33% identity, 43% coverage: 20:235/505 of query aligns to 19:237/344 of 3tuiC
Sites not aligning to the query:
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
34% identity, 43% coverage: 4:221/505 of query aligns to 16:226/378 of P69874
Sites not aligning to the query:
5x40A Structure of a cbio dimer bound with amppcp (see paper)
35% identity, 43% coverage: 5:221/505 of query aligns to 2:218/280 of 5x40A
8wm7D Cryo-em structure of cyanobacterial nitrate/nitrite transporter nrtbcd in complex with signalling protein pii (see paper)
32% identity, 43% coverage: 7:222/505 of query aligns to 4:217/257 of 8wm7D
8dneA Cryoem structure of the a.Aeolicus wzmwzt transporter bound to atp (see paper)
28% identity, 48% coverage: 23:263/505 of query aligns to 37:262/371 of 8dneA
Sites not aligning to the query:
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
26% identity, 42% coverage: 7:219/505 of query aligns to 1:212/240 of 4ymuJ
8w9mD Cryo-em structure of the cyanobacterial nitrate transporter nrtbcd in complex with atp (see paper)
31% identity, 43% coverage: 7:222/505 of query aligns to 2:215/256 of 8w9mD
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
27% identity, 47% coverage: 7:242/505 of query aligns to 4:254/254 of 1g6hA