Comparing WP_109738207.1 NCBI__GCF_002899945.2:WP_109738207.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
Q39232 Sucrose transport protein SUC1; AtSUC1; Sucrose permease 1; Sucrose-proton symporter 1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
25% identity, 89% coverage: 23:437/467 of query aligns to 42:474/513 of Q39232
>WP_109738207.1 NCBI__GCF_002899945.2:WP_109738207.1
MNKKIIPRLSFWQIWNMNVGFFGIQYSFGLQQTAVNPLYSFLGAHADQLPILNLAGPVTG
LLIQPLIGAISDKTWSVKWGRRKPFFLLGAILCSLALFVFPFSSSIWMAVGLLWILDAAN
NTAMEPYRAFIGDKLPEEQQTYGFQMQSLFVGGGITLANLSLFIFQKYFGGSSESGGIPT
WVYYSFFLGSFCSVASVVWSVYKTPEIPPTDEELIQLKAEKENDTVFTPFIDIFKAIVNM
PKILWQLALVYLFQWYALFCYWQFATPMIKQTLYHVSEIDEERANRFVELSKNGFSVPQN
DLLWAKNILHLVEQAVGQTGLMNGFYNFITMISALLLIPFALKFSAKNVYAFCLLATGIS
LLVLPLCTNEYIILLPMVLFGIGWAAMMGLPYSMVSPSIPANKRGVYMGVINMMIVIPML
IQTLTFGAFYKYILGSNPADAIRIAGILFLLASFSVILMKVNRPAAD
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory