SitesBLAST
Comparing WP_109939357.1 NCBI__GCF_003173335.1:WP_109939357.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 13 hits to proteins with known functional sites (download)
7jsjA Structure of the nact-pf2 complex (see paper)
39% identity, 93% coverage: 33:499/502 of query aligns to 26:467/468 of 7jsjA
- binding sodium ion: S124 (= S131), I127 (= I134), S128 (= S135), N129 (= N136), G172 (= G193), T366 (= T397), T369 (= T400), S370 (= S401), N371 (= N402), A413 (= A444), T414 (= T445)
- binding (2R)-2-[2-(4-tert-butylphenyl)ethyl]-2-hydroxybutanedioic acid: N129 (= N136), T130 (= T137), T173 (≠ S194), G315 (= G346), I316 (= I347), N371 (= N402)
Q86YT5 Na(+)/citrate cotransporter; NaCT; Sodium-coupled citrate transporter; Sodium-dependent citrate transporter; Solute carrier family 13 member 5 from Homo sapiens (Human) (see 5 papers)
36% identity, 93% coverage: 33:499/502 of query aligns to 38:561/568 of Q86YT5
- T142 (= T137) to M: in DEE25; no loss of localization to plasma membrane; loss of function in citrate transport; dbSNP:rs761917087
- G219 (= G186) to E: loss of localization to plasma membrane; loss of function in citrate transport; dbSNP:rs150024888; to R: in DEE25; loss of function in citrate transport; loss of localization to plasma membrane; dbSNP:rs144332569
- T227 (≠ S194) to M: in DEE25; loss of function in citrate transport; no effect on localization to plasma membrane; dbSNP:rs587777577
- D243 (= D210) to N: no effect on localization to plasma membrane; no effect on its function in citrate transport; dbSNP:rs142262032
- G409 (= G346) mutation to Q: No effect on its function in citrate transport.
- I410 (= I347) mutation I->A,F: Significant loss of function in citrate transport.; mutation to V: No effect on its function in citrate transport.
- L420 (= L357) to P: loss of localization to plasma membrane; loss of function in citrate transport; dbSNP:rs150738356
- S427 (= S364) to L: in DEE25; loss of localization to plasma membrane; loss of function in citrate transport; dbSNP:rs548065551
- L485 (≠ I422) to R: no effect on localization to plasma membrane; reduced function in citrate transport; increased Km and Vmax values compared with that of wild type with citrate as substrate; dbSNP:rs148049520
- L488 (≠ A425) to P: in DEE25; loss of function in citrate transport; loss of localization to plasma membrane; dbSNP:rs587777578
- D524 (= D461) to H: in DEE25; loss of function in citrate transport; no effect on localization to plasma membrane; dbSNP:rs863225448
Sites not aligning to the query:
- 341:568 natural variant: Missing (in DEE25; loss of localization to plasma membrane; loss of function in citrate transport)
- 562 modified: carbohydrate, N-linked (GlcNAc...) asparagine
8w6cA Cryoem structure of nadc1 with citrate (see paper)
35% identity, 93% coverage: 33:501/502 of query aligns to 38:526/530 of 8w6cA
- binding sodium ion: S136 (= S131), I139 (= I134), S140 (= S135), N141 (= N136), G191 (= G193), T423 (= T397), T426 (= T400), S427 (= S401), N428 (= N402), A470 (= A444)
- binding cholesterol hemisuccinate: Y40 (≠ A35), I65 (≠ V60), M69 (≠ L64)
Sites not aligning to the query:
8w6nA Nas1 with sulfate in in/out state (see paper)
36% identity, 93% coverage: 31:499/502 of query aligns to 31:491/494 of 8w6nA
8w6nB Nas1 with sulfate in in/out state (see paper)
36% identity, 93% coverage: 31:499/502 of query aligns to 27:479/481 of 8w6nB
8w6gA Nadc1 with inhibitor aca (see paper)
34% identity, 93% coverage: 33:501/502 of query aligns to 38:523/527 of 8w6gA
Sites not aligning to the query:
Q28615 Solute carrier family 13 member 2; Na(+)/dicarboxylate cotransporter 1; NaDC-1; Renal sodium/dicarboxylate cotransporter from Oryctolagus cuniculus (Rabbit) (see paper)
33% identity, 93% coverage: 33:499/502 of query aligns to 38:575/593 of Q28615
- L83 (≠ A78) mutation to C: Decreases cell membrane expression. Decreases succinate transport activity. Decreases Km value for succinate.
- T86 (= T81) mutation to C: Does not affect cell membrane localization. Decreases succinate transport activity.
- Y228 (= Y181) mutation to C: Does not affect cell membrane localization. Decreases succinate transport activity.
- Y432 (≠ I355) mutation to C: Does not affect cell membrane localization. Decreases succinate transport activity. Decreases Km value for succinate. More sensitive to inhibition by lithium.
- T474 (= T397) mutation to C: Does not affect cell membrane localization. Abolishes succinate transport activity.
- N525 (= N448) mutation to C: Decreases cell membrane expression. Decreases succinate transport activity.
- M539 (≠ L462) mutation to C: Does not affect cell membrane localization. Decreases succinate transport activity. Insensitive to inhibition by lithium.
8w6hA Nas1 with sulfate - in/in state (see paper)
35% identity, 93% coverage: 31:499/502 of query aligns to 26:460/462 of 8w6hA
6okzB Structure of vcindy bound to fumarate
32% identity, 90% coverage: 25:478/502 of query aligns to 20:436/444 of 6okzB