SitesBLAST
Comparing WP_110207863.1 NCBI__GCF_003194585.1:WP_110207863.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
3bs8A Crystal structure of glutamate 1-semialdehyde aminotransferase complexed with pyridoxamine-5'-phosphate from bacillus subtilis (see paper)
47% identity, 93% coverage: 18:434/450 of query aligns to 6:419/430 of 3bs8A
- active site: V22 (= V34), Y145 (= Y156), E207 (= E218), D240 (= D251), M243 (= M254), K268 (= K283), G401 (≠ A416)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G118 (= G129), T119 (= T130), Y145 (= Y156), H146 (= H157), E207 (= E218), N212 (= N223), D240 (= D251), V242 (= V253), K268 (= K283)
P23893 Glutamate-1-semialdehyde 2,1-aminomutase; GSA; Glutamate-1-semialdehyde aminotransferase; GSA-AT; EC 5.4.3.8 from Escherichia coli (strain K12) (see paper)
52% identity, 93% coverage: 17:434/450 of query aligns to 2:418/426 of P23893
- K265 (= K283) mutation to R: 2% of wild-type activity.
5i92F Crystal structure of glutamate-1-semialdehyde 2,1- aminomutase (gsa) from pseudomonas aeruginosa
50% identity, 94% coverage: 17:441/450 of query aligns to 2:420/420 of 5i92F
6w80A Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from stenotrophomonas maltophilia k279a in complex with plp
52% identity, 92% coverage: 18:432/450 of query aligns to 10:419/430 of 6w80A
- active site: V26 (= V34), Y149 (= Y156), D241 (= D251), K269 (= K283)
- binding pyridoxal-5'-phosphate: S121 (= S128), G122 (= G129), T123 (= T130), Y149 (= Y156), H150 (= H157), E208 (= E218), N213 (= N223), D241 (= D251), V243 (= V253), K269 (= K283)
2e7uA Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from thermus thermophilus hb8
50% identity, 93% coverage: 19:438/450 of query aligns to 6:423/424 of 2e7uA
- active site: V21 (= V34), Y144 (= Y156), E206 (= E218), D238 (= D251), M241 (= M254), K266 (= K283), A401 (= A416)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G117 (= G129), T118 (= T130), Y144 (= Y156), H145 (= H157), N211 (= N223), D238 (= D251), V240 (= V253)
3k28A Crystal structure of a glutamate-1-semialdehyde aminotransferase from bacillus anthracis with bound pyridoxal 5'phosphate
48% identity, 91% coverage: 18:425/450 of query aligns to 6:405/423 of 3k28A
- active site: V22 (= V34), Y145 (= Y156), E202 (= E218), D235 (= D251), M238 (= M254), K263 (= K283), G396 (≠ A416)
- binding calcium ion: I103 (≠ V115), V106 (≠ T118), P107 (vs. gap), I109 (≠ V120)
- binding pyridoxal-5'-phosphate: G118 (= G129), T119 (= T130), Y145 (= Y156), H146 (= H157), G147 (= G158), E202 (= E218), D235 (= D251), V237 (= V253), M238 (= M254), K263 (= K283)
Q42522 Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic; GSA 2; Glutamate-1-semialdehyde aminotransferase 2; GSA-AT 2; EC 5.4.3.8 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
46% identity, 93% coverage: 18:434/450 of query aligns to 50:464/472 of Q42522
- R92 (≠ T60) mutation to K: In gsa2-1; suppression of enf1 mutant pleiotropic developmental phenotypes; when associated with S-162.
- G162 (= G129) mutation to S: In gsa2-1; suppression of enf1 mutant pleiotropic developmental phenotypes; when associated with K-92.
P42799 Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic; AtGSA1; GSA 1; Glutamate-1-semialdehyde aminotransferase 1; GSA-AT 1; EC 5.4.3.8 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
45% identity, 95% coverage: 8:434/450 of query aligns to 42:466/474 of P42799
- K314 (= K283) modified: N6-(pyridoxal phosphate)lysine
5hdmB Crystal structure of arabidopsis thaliana glutamate-1-semialdehyde-2, 1-aminomutase (see paper)
46% identity, 93% coverage: 18:434/450 of query aligns to 6:420/428 of 5hdmB
- active site: V22 (= V34), Y145 (= Y156), E207 (= E218), D240 (= D251), M243 (= M254), K268 (= K283), A402 (= A416)
- binding pyridoxal-5'-phosphate: G118 (= G129), T119 (= T130), Y145 (= Y156), E207 (= E218), N212 (= N223), D240 (= D251), V242 (= V253), M243 (= M254), K268 (= K283)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G118 (= G129), T119 (= T130), Y145 (= Y156), E207 (= E218), N212 (= N223), D240 (= D251), V242 (= V253), M243 (= M254), K268 (= K283)
5hdmA Crystal structure of arabidopsis thaliana glutamate-1-semialdehyde-2, 1-aminomutase (see paper)
46% identity, 93% coverage: 18:434/450 of query aligns to 6:420/428 of 5hdmA
- active site: V22 (= V34), Y145 (= Y156), E207 (= E218), D240 (= D251), M243 (= M254), K268 (= K283), A402 (= A416)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G118 (= G129), T119 (= T130), Y145 (= Y156), G147 (= G158), E207 (= E218), N212 (= N223), D240 (= D251), V242 (= V253), K268 (= K283)
2gsaB Crystal structure of glutamate-1-semialdehyde aminomutase (aminotransferase, wild-type form) (see paper)
45% identity, 93% coverage: 15:434/450 of query aligns to 2:419/427 of 2gsaB
- active site: V21 (= V34), Y144 (= Y156), E206 (= E218), D239 (= D251), M242 (= M254), K267 (= K283), A401 (= A416)
- binding pyridoxal-5'-phosphate: G117 (= G129), T118 (= T130), Y144 (= Y156), E206 (= E218), N211 (= N223), D239 (= D251), V241 (= V253), M242 (= M254), K267 (= K283)
2gsaA Crystal structure of glutamate-1-semialdehyde aminomutase (aminotransferase, wild-type form) (see paper)
45% identity, 93% coverage: 15:434/450 of query aligns to 2:419/427 of 2gsaA
- active site: V21 (= V34), Y144 (= Y156), E206 (= E218), D239 (= D251), M242 (= M254), K267 (= K283), A401 (= A416)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G117 (= G129), T118 (= T130), Y144 (= Y156), H145 (= H157), G146 (= G158), N211 (= N223), D239 (= D251), V241 (= V253), K267 (= K283)
3usfA Crystal structure of dava-4
45% identity, 93% coverage: 15:434/450 of query aligns to 2:419/427 of 3usfA
- active site: V21 (= V34), Y144 (= Y156), D239 (= D251), M242 (= M254), K267 (= K283), A401 (= A416)
- binding (4s)-4,5-diaminopentanoic acid: S23 (= S36), V25 (= V38), S157 (= S169), K267 (= K283), E400 (= E415)
- binding (5-hydroxy-4,6-dimethylpyridin-3-yl)methyl dihydrogen phosphate: G117 (= G129), T118 (= T130), Y144 (= Y156), N211 (= N223), D239 (= D251), V241 (= V253), K267 (= K283)
3fq7A Gabaculine complex of gsam (see paper)
45% identity, 93% coverage: 15:434/450 of query aligns to 2:419/427 of 3fq7A
- active site: V21 (= V34), Y144 (= Y156), D239 (= D251), M242 (= M254), K267 (= K283), A401 (= A416)
- binding 3-[o-phosphonopyridoxyl]--amino-benzoic acid: S23 (= S36), V25 (= V38), W61 (= W74), G117 (= G129), T118 (= T130), Y144 (= Y156), H145 (= H157), E206 (= E218), N211 (= N223), D239 (= D251), V241 (= V253), M242 (= M254), K267 (= K283), G298 (= G314), T299 (= T315), E400 (= E415)
2hp2A Inter-subunit signaling in gsam (see paper)
45% identity, 93% coverage: 15:434/450 of query aligns to 2:419/427 of 2hp2A
- active site: V21 (= V34), Y144 (= Y156), D239 (= D251), M242 (= M254), K267 (= K283), A401 (= A416)
- binding (4s)-4,5-diaminopentanoic acid: G298 (= G314), T299 (= T315)
- binding (4r)-5-amino-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]pentanoic acid: S23 (= S36), G117 (= G129), T118 (= T130), Y144 (= Y156), H145 (= H157), E206 (= E218), N211 (= N223), D239 (= D251), V241 (= V253), M242 (= M254), K267 (= K283)
- binding pyridoxal-5'-phosphate: G298 (= G314), T299 (= T315)
2hp1A Inter-subunit signaling in gsam (see paper)
45% identity, 93% coverage: 15:434/450 of query aligns to 2:419/427 of 2hp1A
- active site: V21 (= V34), Y144 (= Y156), D239 (= D251), M242 (= M254), K267 (= K283), A401 (= A416)
- binding (4s)-4-amino-5-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]pentanoic acid: S23 (= S36), V25 (= V38), W61 (= W74), S116 (= S128), G117 (= G129), T118 (= T130), Y144 (= Y156), H145 (= H157), G146 (= G158), E206 (= E218), N211 (= N223), D239 (= D251), V241 (= V253), M242 (= M254), K267 (= K283), E400 (= E415)
2hozA Inter-subunit signaling in gsam (see paper)
45% identity, 93% coverage: 15:434/450 of query aligns to 2:419/427 of 2hozA
- active site: V21 (= V34), Y144 (= Y156), D239 (= D251), M242 (= M254), K267 (= K283), A401 (= A416)
- binding (4s)-4,5-diaminopentanoic acid: E141 (≠ A153), G156 (= G168), S157 (= S169), P182 (= P194), N368 (≠ D383), E370 (≠ A385), K373 (≠ N388)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G117 (= G129), T118 (= T130), Y144 (= Y156), H145 (= H157), G146 (= G158), E206 (= E218), N211 (= N223), D239 (= D251), G298 (= G314), T299 (= T315)
3fqaA Gabaculien complex of gabaculine resistant gsam version (see paper)
45% identity, 93% coverage: 15:434/450 of query aligns to 1:418/426 of 3fqaA
- active site: V20 (= V34), Y143 (= Y156), D238 (= D251), I241 (≠ M254), K266 (= K283), A400 (= A416)
- binding 3-aminobenzoic acid: S22 (= S36), R25 (= R39), W60 (= W74)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G116 (= G129), T117 (= T130), Y143 (= Y156), E205 (= E218), N210 (= N223), D238 (= D251), V240 (= V253), I241 (≠ M254)
2zsmA Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from aeropyrum pernix, hexagonal form
45% identity, 93% coverage: 18:435/450 of query aligns to 8:415/425 of 2zsmA
- active site: V24 (= V34), Y145 (= Y156), E201 (= E218), D234 (= D251), V237 (≠ M254), K262 (= K283), A396 (= A416)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: S117 (= S128), G118 (= G129), T119 (= T130), Y145 (= Y156), H146 (= H157), E201 (= E218), D234 (= D251), K262 (= K283)
3usfB Crystal structure of dava-4
41% identity, 93% coverage: 15:434/450 of query aligns to 2:394/402 of 3usfB
- active site: V21 (= V34), Y144 (= Y156), E181 (= E218), D214 (= D251), M217 (= M254), K242 (= K283), A376 (= A416)
- binding (4s)-4,5-diaminopentanoic acid: G273 (= G314), T274 (= T315)
- binding (5-hydroxy-4,6-dimethylpyridin-3-yl)methyl dihydrogen phosphate: G117 (= G129), T118 (= T130), Y144 (= Y156), E181 (= E218), N186 (= N223), D214 (= D251), V216 (= V253), M217 (= M254), K242 (= K283)
Query Sequence
>WP_110207863.1 NCBI__GCF_003194585.1:WP_110207863.1
MTSSSPRDHASPQARPAQSQALFERATAVTPGGVNSPVRAFNAVGGTPRFITSADGAWLT
DADGNRYVDLICSWGPMLLGHNHPEVRAAVTEAVSRGTSYGTPTVPEVELAEELVARTSV
ERVRFVSSGTEATMSAIRLARGFTGRDMVVKFAGCYHGHVDALLVSAGSGLVTLGVPGTP
GVPESATALTLVLPYNDRAAVTAAFAEHGDRIACLVTEAAPGNMGVVPPEPGFNGFLAET
CRAHGALFLSDEVMTGFRASRQGQWGLDGAVEGWTPDLVTFGKVMGGGFPAAAFGGRADV
MAHLAPEGGVYQAGTLSGNPIATTAGLTTLRLATPEVYDHLNRAGDVVKQAVGEALTAAG
VPHVVQSAGTMFSVFFGCDPVRDFAGANRQHLPAYAAFFHAMLDAGVHLPPSAFEAWFLS
AAHDDQALQAVVDALPAAATAAAQTLDTHS
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory