Comparing WP_110208105.1 NCBI__GCF_003194585.1:WP_110208105.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
29% identity, 90% coverage: 1:238/263 of query aligns to 2:253/254 of 1g6hA
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
31% identity, 86% coverage: 13:238/263 of query aligns to 12:235/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
31% identity, 86% coverage: 13:238/263 of query aligns to 12:235/238 of 6s8gA
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
31% identity, 86% coverage: 13:238/263 of query aligns to 12:235/235 of 6mhzA
6mbnA Lptb e163q in complex with atp (see paper)
30% identity, 86% coverage: 13:238/263 of query aligns to 13:236/241 of 6mbnA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
29% identity, 90% coverage: 1:238/263 of query aligns to 2:253/253 of 1g9xB
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
30% identity, 86% coverage: 13:237/263 of query aligns to 12:234/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
30% identity, 86% coverage: 13:237/263 of query aligns to 12:234/234 of 4p31A
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
30% identity, 85% coverage: 13:236/263 of query aligns to 12:233/233 of 6b8bA
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
33% identity, 86% coverage: 3:227/263 of query aligns to 4:224/285 of 4yerA
8f5bA Human abca4 structure in complex with amp-pnp (see paper)
35% identity, 79% coverage: 15:223/263 of query aligns to 734:936/1924 of 8f5bA
Sites not aligning to the query:
P78363 Retinal-specific phospholipid-transporting ATPase ABCA4; ATP-binding cassette sub-family A member 4; RIM ABC transporter; RIM proteinv; RmP; Retinal-specific ATP-binding cassette transporter; Stargardt disease protein; EC 7.6.2.1 from Homo sapiens (Human) (see 43 papers)
35% identity, 79% coverage: 15:223/263 of query aligns to 942:1144/2273 of P78363