SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_110804641.1 NCBI__GCF_003217355.1:WP_110804641.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 3 hits to proteins with known functional sites (download)

2e2pA Crystal structure of sulfolobus tokodaii hexokinase in complex with adp (see paper)
27% identity, 35% coverage: 220:393/493 of query aligns to 2:176/298 of 2e2pA

query
sites
2e2pA
M
 
M
V
 
I
Y
 
I
L
 
V
A
 
G
I
 
V
D
 
D
G
 
A
G
 
G
G
 
G
S
 
T
G
 
K
C
 
T
R
 
K
A
 
A
A
 
V
L
 
A
C
 
Y
D
 
D
D
 
C
A
 
E
G
 
G
Q
 
N
E
 
F
L
 
I
A
 
G
R
 
E
A
 
G
E
 
S
G
 
S
G
 
G
P
 
P
A
 
G
N
 
N
I
 
Y
A
 
H
S
 
N
-
 
V
D
 
G
F
 
L
D
 
T
T
 
R
A
 
A
L
 
I
A
 
E
S
 
N
L
 
I
R
 
K
E
 
E
L
 
-
A
 
A
L
 
V
R
 
K
M
 
I
I
 
A
G
 
A
D
 
K
R
 
G
P
 
E
L
 
A
D
 
D
Q
 
V
V
 
V
R
 
G
A
 
-
V
 
-
L
 
M
G
 
G
V
 
V
A
 
A
G
 
G
A
 
L
N
 
D
L
 
-
S
 
-
G
 
-
A
 
S
G
 
K
P
 
F
R
 
D
L
 
W
E
 
E
A
 
N
A
 
F
L
 
T
P
 
P
F
 
L
R
 
A
A
 
S
K
 
L
V
 
I
V
 
A
Q
 
P
D
 
K
V
 
V
T
 
I
T
 
I
S
 
Q
L
 
H
R
 
D
G
 
G
A
 
V
-
 
I
-
 
A
-
 
L
-
 
F
-
 
A
-
 
E
-
 
T
L
 
L
G
 
G
D
 
E
A
 
P
D
 
-
G
 
G
I
 
V
M
 
V
A
 
V
A
 
I
I
 
A
G
|
G
T
|
T
G
 
G
S
 
S
V
 
V
F
 
V
A
 
E
R
 
G
Q
 
Y
V
 
N
G
 
G
G
 
K
E
 
E
V
 
F
K
 
L
A
 
R
I
 
V
G
 
G
G
 
G
W
 
R
G
 
G
F
 
W
R
 
L
L
 
L
G
 
S
D
 
D
E
 
D
A
 
G
S
 
S
G
 
A
A
 
Y
W
 
W
M
 
V
G
 
G
R
 
R
L
 
K
M
 
A
L
 
L
N
 
R
R
 
K
I
 
V
T
 
L
R
 
K
M
 
M
L
 
M
D
 
D
G
 
G
Y
 
L
A
 
E
P
 
N
L
 
K
S
 
T
P
 
I
L
 
L
A
 
Y
K
 
N
A
 
K
V
 
V
L
 
L
D
 
K
D
 
T
L
 
I

Sites not aligning to the query:

2e2qA Crystal structure of sulfolobus tokodaii hexokinase in complex with xylose, mg2+, and adp (see paper)
27% identity, 35% coverage: 220:393/493 of query aligns to 2:176/297 of 2e2qA

query
sites
2e2qA
M
 
M
V
 
I
Y
 
I
L
 
V
A
 
G
I
 
V
D
 
D
G
 
A
G
|
G
G
|
G
S
x
T
G
x
K
C
 
T
R
x
K
A
 
A
A
 
V
L
 
A
C
 
Y
D
 
D
D
 
C
A
 
E
G
 
G
Q
 
N
E
 
F
L
 
I
A
 
G
R
 
E
A
 
G
E
 
S
G
 
S
G
 
G
P
 
P
A
 
G
N
 
N
I
 
Y
A
 
H
S
 
N
-
 
V
D
 
G
F
 
L
D
 
T
T
 
R
A
 
A
L
 
I
A
 
E
S
 
N
L
 
I
R
 
K
E
 
E
L
 
-
A
 
A
L
 
V
R
 
K
M
 
I
I
 
A
G
 
A
D
 
K
R
 
G
P
 
E
L
 
A
D
 
D
Q
 
V
V
 
V
R
 
G
A
 
-
V
 
-
L
 
M
G
 
G
V
 
V
A
 
A
G
 
G
A
 
L
N
x
D
L
 
-
S
 
-
G
 
-
A
 
S
G
 
K
P
 
F
R
 
D
L
 
W
E
 
E
A
 
N
A
 
F
L
 
T
P
 
P
F
 
L
R
 
A
A
 
S
K
 
L
V
 
I
V
 
A
Q
 
P
D
 
K
V
 
V
T
 
I
T
 
I
S
 
Q
L
x
H
R
x
D
G
 
G
A
 
V
-
 
I
-
 
A
-
 
L
-
 
F
-
 
A
-
 
E
-
 
T
L
 
L
G
 
G
D
 
E
A
 
P
D
 
-
G
 
G
I
 
V
M
 
V
A
 
V
A
 
I
I
 
A
G
|
G
T
|
T
G
|
G
S
|
S
V
 
V
F
 
V
A
 
E
R
 
G
Q
 
Y
V
 
N
G
 
G
G
 
K
E
 
E
V
 
F
K
 
L
A
 
R
I
 
V
G
 
G
G
|
G
W
 
R
G
 
G
F
 
W
R
 
L
L
 
L
G
 
S
D
|
D
E
 
D
A
 
G
S
 
S
G
 
A
A
 
Y
W
 
W
M
 
V
G
 
G
R
 
R
L
 
K
M
 
A
L
 
L
N
 
R
R
 
K
I
 
V
T
 
L
R
 
K
M
 
M
L
 
M
D
 
D
G
 
G
Y
 
L
A
 
E
P
 
N
L
 
K
S
 
T
P
 
I
L
 
L
A
 
Y
K
 
N
A
 
K
V
 
V
L
 
L
D
 
K
D
 
T
L
 
I

Sites not aligning to the query:

2e2oA Crystal structure of sulfolobus tokodaii hexokinase in complex with glucose (see paper)
27% identity, 35% coverage: 220:393/493 of query aligns to 2:176/299 of 2e2oA

query
sites
2e2oA
M
 
M
V
 
I
Y
 
I
L
 
V
A
 
G
I
 
V
D
 
D
G
 
A
G
 
G
G
 
G
S
 
T
G
 
K
C
 
T
R
 
K
A
 
A
A
 
V
L
 
A
C
 
Y
D
 
D
D
 
C
A
 
E
G
 
G
Q
 
N
E
 
F
L
 
I
A
 
G
R
 
E
A
 
G
E
 
S
G
 
S
G
 
G
P
 
P
A
 
G
N
 
N
I
 
Y
A
 
H
S
 
N
-
 
V
D
 
G
F
 
L
D
 
T
T
 
R
A
 
A
L
 
I
A
 
E
S
 
N
L
 
I
R
 
K
E
 
E
L
 
-
A
 
A
L
 
V
R
 
K
M
 
I
I
 
A
G
 
A
D
 
K
R
 
G
P
 
E
L
 
A
D
 
D
Q
 
V
V
 
V
R
 
G
A
 
-
V
 
-
L
 
M
G
 
G
V
 
V
A
 
A
G
|
G
A
 
L
N
x
D
L
 
-
S
 
-
G
 
-
A
 
S
G
 
K
P
 
F
R
 
D
L
 
W
E
 
E
A
 
N
A
 
F
L
 
T
P
 
P
F
 
L
R
 
A
A
 
S
K
 
L
V
 
I
V
 
A
Q
 
P
D
 
K
V
 
V
T
 
I
T
 
I
S
 
Q
L
x
H
R
x
D
G
 
G
A
 
V
-
 
I
-
 
A
-
 
L
-
 
F
-
 
A
-
 
E
-
 
T
L
 
L
G
 
G
D
 
E
A
 
P
D
 
-
G
 
G
I
 
V
M
 
V
A
 
V
A
 
I
I
 
A
G
 
G
T
 
T
G
|
G
S
|
S
V
|
V
F
 
V
A
 
E
R
 
G
Q
 
Y
V
 
N
G
 
G
G
 
K
E
 
E
V
 
F
K
 
L
A
 
R
I
 
V
G
 
G
G
|
G
W
 
R
G
 
G
F
 
W
R
 
L
L
 
L
G
 
S
D
|
D
E
 
D
A
 
G
S
 
S
G
 
A
A
 
Y
W
 
W
M
 
V
G
 
G
R
 
R
L
 
K
M
 
A
L
 
L
N
 
R
R
 
K
I
 
V
T
 
L
R
 
K
M
 
M
L
 
M
D
 
D
G
 
G
Y
 
L
A
 
E
P
 
N
L
 
K
S
 
T
P
 
I
L
 
L
A
 
Y
K
 
N
A
 
K
V
 
V
L
 
L
D
 
K
D
 
T
L
 
I

Query Sequence

>WP_110804641.1 NCBI__GCF_003217355.1:WP_110804641.1
MAAEPRDLAPIDRIDRRRGRRGMVGDLQKQPLLLALHRKDLDVPRLARPRQSRTPGLALE
EGLVTLEGGLDGICADGADGGAQHRLLRGFRRRGIAADRSATAPQHETALGPVAGRIRID
AEAIRRHQRHLALLHRHLAGDRLSRRQMQVEFHRECVETARKGKAQAQSDQDPFHRPPFA
ASLFLARGATRGQARFARTQGFALPQGACHGILGRTEANMVYLAIDGGGSGCRAALCDDA
GQELARAEGGPANIASDFDTALASLRELALRMIGDRPLDQVRAVLGVAGANLSGAGPRLE
AALPFRAKVVQDVTTSLRGALGDADGIMAAIGTGSVFARQVGGEVKAIGGWGFRLGDEAS
GAWMGRLMLNRITRMLDGYAPLSPLAKAVLDDLGGGPGLVAFTLKKTPADHALLVHRMAA
ALEDPLSRQVLTETRAELRAAIGLLQTDPPLPVVWLGGLGPTLALTDWPRTEPLGSSLDG
AMAMARDEATWAA

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory