SitesBLAST
Comparing WP_110804869.1 NCBI__GCF_003217355.1:WP_110804869.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
P25526 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli (strain K12) (see paper)
63% identity, 98% coverage: 12:492/492 of query aligns to 3:482/482 of P25526
3jz4A Crystal structure of e. Coli NADP dependent enzyme (see paper)
63% identity, 98% coverage: 12:492/492 of query aligns to 2:481/481 of 3jz4A
- active site: N156 (= N166), K179 (≠ R189), E254 (= E265), C288 (= C299), E385 (= E396), E462 (= E473)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: P154 (= P164), W155 (= W165), K179 (≠ R189), A181 (= A191), S182 (= S192), A212 (= A223), G216 (= G227), G232 (= G243), S233 (= S244), I236 (≠ V247), C288 (= C299), K338 (= K349), E385 (= E396), F387 (= F398)
8c54A Cryo-em structure of nadh bound sla dehydrogenase rlgabd from rhizobium leguminosarum bv. Trifolii srd1565 (see paper)
63% identity, 97% coverage: 12:490/492 of query aligns to 2:479/482 of 8c54A
- binding 1,4-dihydronicotinamide adenine dinucleotide: I152 (= I162), T153 (= T163), P154 (= P164), K179 (≠ R189), A212 (= A223), K213 (≠ S224), F230 (= F241), T231 (= T242), G232 (= G243), S233 (= S244), V236 (= V247), W239 (≠ I250), G256 (= G267)
8of1A Structure of aldh5f1 from moss physcomitrium patens in complex with NAD+ in the contracted conformation
52% identity, 97% coverage: 12:490/492 of query aligns to 20:497/505 of 8of1A
- binding nicotinamide-adenine-dinucleotide: I170 (= I162), A171 (≠ T163), P172 (= P164), W173 (= W165), K197 (≠ R189), A230 (= A223), F248 (= F241), G250 (= G243), S251 (= S244), V254 (= V247), M257 (≠ I250), L273 (= L266), C306 (= C299), K356 (= K349), E403 (= E396), F405 (= F398)
P51649 Succinate-semialdehyde dehydrogenase, mitochondrial; Aldehyde dehydrogenase family 5 member A1; NAD(+)-dependent succinic semialdehyde dehydrogenase; EC 1.2.1.24 from Homo sapiens (Human) (see 5 papers)
54% identity, 96% coverage: 16:489/492 of query aligns to 57:531/535 of P51649
- C93 (≠ L54) to F: in SSADHD; 3% of activity; dbSNP:rs765561257
- G176 (= G137) to R: in SSADHD; <1% of activity; dbSNP:rs72552281
- H180 (≠ P141) to Y: 83% of activity; dbSNP:rs2760118
- P182 (≠ H143) to L: 48% of activity; dbSNP:rs3765310
- R213 (= R174) binding substrate; mutation to A: Reduces catalytic activity to less than 15% of wild-type.
- C223 (= C184) to Y: in SSADHD; 5% of activity; dbSNP:rs72552282
- KPAE 228:231 (≠ RPAS 189:192) binding NAD(+)
- T233 (= T194) to M: in SSADHD; 4% of activity; dbSNP:rs1326526453
- A237 (= A198) to S: 65% of activity; dbSNP:rs62621664
- N255 (≠ S216) to S: in SSADHD; 17% of activity; dbSNP:rs145087265
- G268 (= G227) to E: in SSADHD; <1% of activity; dbSNP:rs375628463
- GSTTTG 284:289 (≠ GSTEVG 243:248) binding NAD(+)
- R334 (= R293) binding substrate; mutation to A: Reduces catalytic activity to less than 15% of wild-type.
- N335 (= N294) to K: in SSADHD; 1% of activity; dbSNP:rs72552283
- C340 (= C299) modified: Disulfide link with 342, In inhibited form
- C342 (= C301) modified: Disulfide link with 340, In inhibited form; mutation to A: Loss of regulation by redox state.
- N372 (≠ D330) natural variant: N -> S
- P382 (= P340) to L: in SSADHD; 2% of activity
- V406 (≠ I364) to I: in dbSNP:rs143741652
- G409 (= G367) to D: in SSADHD; <1% of activity; dbSNP:rs118203984
- S498 (= S456) binding substrate; mutation to A: Reduces catalytic activity to less than 15% of wild-type.
Sites not aligning to the query:
- 36 G → R: no effect on succinate-semialdehyde dehydrogenase activity; dbSNP:rs4646832
- 533 G → R: in SSADHD; <1% of activity; dbSNP:rs72552284
2w8rA The crystal structure of human ssadh in complex with NAD+ (see paper)
54% identity, 96% coverage: 16:489/492 of query aligns to 7:481/485 of 2w8rA
2w8qA The crystal structure of human ssadh in complex with ssa. (see paper)
54% identity, 96% coverage: 16:489/492 of query aligns to 7:481/485 of 2w8qA
6j76A Structure of 3,6-anhydro-l-galactose dehydrogenase in complex with nap (see paper)
38% identity, 95% coverage: 21:486/492 of query aligns to 3:471/477 of 6j76A
- active site: N148 (= N166), E246 (= E265), C280 (= C299), E458 (= E473)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: I144 (= I162), T145 (= T163), A146 (≠ P164), W147 (= W165), N148 (= N166), K171 (≠ R189), T173 (≠ A191), S174 (= S192), G204 (≠ A223), G208 (= G227), T223 (= T242), G224 (= G243), S225 (= S244), A228 (≠ V247), S231 (≠ I250), I232 (≠ L251), E246 (= E265), L247 (= L266), C280 (= C299), E381 (= E396), F383 (= F398), H447 (≠ F462)
4pxlA Structure of zm aldh2-3 (rf2c) in complex with NAD (see paper)
39% identity, 96% coverage: 20:492/492 of query aligns to 6:480/486 of 4pxlA
- active site: N154 (= N166), K177 (≠ R189), E253 (= E265), C287 (= C299), E384 (= E396), D461 (≠ E473)
- binding nicotinamide-adenine-dinucleotide: I150 (= I162), V151 (≠ T163), P152 (= P164), W153 (= W165), K177 (≠ R189), E180 (≠ S192), G210 (≠ R222), G214 (= G227), A215 (≠ K228), F228 (= F241), G230 (= G243), S231 (= S244), V234 (= V247), E253 (= E265), G255 (= G267), C287 (= C299), Q334 (≠ A346), K337 (= K349), E384 (= E396), F386 (= F398)
Q56YU0 Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
37% identity, 99% coverage: 7:492/492 of query aligns to 7:495/501 of Q56YU0