SitesBLAST
Comparing WP_110805920.1 NCBI__GCF_003217355.1:WP_110805920.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
9dl6A Bifunctional protein PutA (see paper)
49% identity, 99% coverage: 15:1126/1127 of query aligns to 29:1216/1218 of 9dl6A
- binding (3S)-piperidine-3-carboxylic acid: E659 (= E626), F693 (= F657), R828 (= R790), C829 (= C791), S830 (= S792), G987 (= G944), A988 (= A945)
- binding flavin-adenine dinucleotide: D291 (= D278), A292 (= A279), V323 (= V310), R352 (= R339), V354 (= V341), K355 (= K342), G356 (= G343), A357 (= A344), W359 (= W346), F377 (= F364), T378 (= T365), R379 (≠ S366), K380 (= K367), T383 (= T370), A406 (= A393), T407 (= T394), H408 (= H395), N409 (= N396), Q432 (= Q415), C433 (≠ R416), Y458 (= Y439), E477 (= E458), S483 (= S464), F484 (= F465)
- binding (3R)-piperidine-3-carboxylic acid: E659 (= E626), F693 (= F657), I697 (= I661), R828 (= R790), C829 (= C791), S830 (= S792), G987 (= G944), A988 (= A945), F995 (= F952)
- binding nicotinamide-adenine-dinucleotide: I688 (= I652), S689 (= S653), P690 (= P654), W691 (= W655), N692 (= N656), I697 (= I661), K715 (= K679), A717 (= A681), E718 (= E682), G748 (= G712), G751 (= G716), A752 (= A717), T766 (= T731), G767 (= G732), S768 (= S733), V771 (≠ T736), I775 (= I740), E795 (= E757), T796 (= T758), C829 (= C791), E925 (= E882), F927 (= F884), F995 (= F952)
6x9dA Structure of proline utilization a with trans-4-hydroxy-l-proline bound in the l-glutamate-gamma-semialdehyde dehydrogenase active site (see paper)
49% identity, 99% coverage: 15:1126/1127 of query aligns to 29:1216/1218 of 6x9dA
- active site: N692 (= N656), K715 (= K679), E795 (= E757), C829 (= C791), E925 (= E882), A1007 (= A964)
- binding flavin-adenine dinucleotide: D291 (= D278), A292 (= A279), V323 (= V310), Q325 (= Q312), R352 (= R339), V354 (= V341), K355 (= K342), G356 (= G343), A357 (= A344), Y358 (= Y345), W359 (= W346), F377 (= F364), T378 (= T365), R379 (≠ S366), K380 (= K367), T383 (= T370), A406 (= A393), T407 (= T394), H408 (= H395), N409 (= N396), Q432 (= Q415), C433 (≠ R416), E477 (= E458), S483 (= S464), F484 (= F465)
- binding 4-hydroxyproline: E659 (= E626), F693 (= F657), I697 (= I661), R828 (= R790), S830 (= S792), G987 (= G944), A988 (= A945), F995 (= F952)
- binding nicotinamide-adenine-dinucleotide: I688 (= I652), S689 (= S653), P690 (= P654), W691 (= W655), N692 (= N656), I697 (= I661), K715 (= K679), A717 (= A681), E718 (= E682), G748 (= G712), G751 (= G716), A752 (= A717), T766 (= T731), G767 (= G732), S768 (= S733), V771 (≠ T736), E795 (= E757), T796 (= T758), C829 (= C791), E925 (= E882), F927 (= F884), F995 (= F952)
7mybA Structure of proline utilization a with tetrahydrothiophene-2- carboxylate bound in the proline dehydrogenase active site (see paper)
49% identity, 99% coverage: 15:1126/1127 of query aligns to 29:1215/1217 of 7mybA
- binding flavin-adenine dinucleotide: D290 (= D278), A291 (= A279), V322 (= V310), Q324 (= Q312), R351 (= R339), V353 (= V341), K354 (= K342), G355 (= G343), A356 (= A344), Y357 (= Y345), W358 (= W346), F376 (= F364), T377 (= T365), R378 (≠ S366), K379 (= K367), T382 (= T370), A405 (= A393), T406 (= T394), H407 (= H395), N408 (= N396), C432 (≠ R416), L433 (= L417), E476 (= E458), S482 (= S464), F483 (= F465)
- binding nicotinamide-adenine-dinucleotide: I687 (= I652), S688 (= S653), P689 (= P654), W690 (= W655), N691 (= N656), I696 (= I661), K714 (= K679), E717 (= E682), G747 (= G712), G750 (= G716), T765 (= T731), G766 (= G732), S767 (= S733), V770 (≠ T736), I774 (= I740), E794 (= E757), T795 (= T758), C828 (= C791), E924 (= E882), F926 (= F884), F994 (= F952)
- binding (2S)-thiolane-2-carboxylic acid: K249 (= K237), Y457 (= Y439), Y469 (= Y451), R472 (= R454), R473 (= R455)
- binding (2R)-thiolane-2-carboxylic acid: K249 (= K237), D290 (= D278), Y457 (= Y439), Y469 (= Y451), R472 (= R454), R473 (= R455)
7myaA Structure of proline utilization a with the fad covalently-modified by 1,3-dithiolane (see paper)
49% identity, 99% coverage: 15:1126/1127 of query aligns to 29:1215/1217 of 7myaA