Comparing WP_164924727.1 NCBI__GCF_000018545.1:WP_164924727.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 9 hits to proteins with known functional sites (download)
P54955 N-acetylcysteine deacetylase; S-(2-succino)cysteine metabolism operon protein P; EC 3.5.1.- from Bacillus subtilis (strain 168)
34% identity, 90% coverage: 18:377/398 of query aligns to 10:361/380 of P54955
4ewtA The crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus (see paper)
30% identity, 97% coverage: 5:392/398 of query aligns to 1:388/389 of 4ewtA
P54968 IAA-amino acid hydrolase ILR1; EC 3.5.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
32% identity, 90% coverage: 21:377/398 of query aligns to 55:412/442 of P54968
Sites not aligning to the query:
O04373 IAA-amino acid hydrolase ILR1-like 4; jasmonoyl-L-amino acid hydrolase; EC 3.5.1.-; EC 3.5.1.127 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
30% identity, 97% coverage: 4:391/398 of query aligns to 30:426/440 of O04373
6slfA Nalpha-acylglutamine aminoacylase from corynebacterium sp.Releasing human axilla odorants co-crystallised with high affinity inhibitor (see paper)
31% identity, 91% coverage: 11:371/398 of query aligns to 12:375/398 of 6slfA
3rzaA Crystal structure of a tripeptidase (sav1512) from staphylococcus aureus subsp. Aureus mu50 at 2.10 a resolution
30% identity, 56% coverage: 133:355/398 of query aligns to 131:340/373 of 3rzaA
Sites not aligning to the query:
3ramA Crystal structure of hmra (see paper)
23% identity, 86% coverage: 11:351/398 of query aligns to 11:328/391 of 3ramA
Sites not aligning to the query:
5vo3A Crystal structure of dape in complex with the products (succinic acid and diaminopimelic acid) (see paper)
21% identity, 78% coverage: 13:324/398 of query aligns to 4:318/380 of 5vo3A
Sites not aligning to the query:
P44514 Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see 3 papers)
21% identity, 78% coverage: 15:324/398 of query aligns to 2:314/377 of P44514
Sites not aligning to the query:
>WP_164924727.1 NCBI__GCF_000018545.1:WP_164924727.1
MNFRINNSLLIEAERDAVLELRHAMHREPELSNNEWKTQQRIRGMLERFGLKGATVFHNT
GLYIDIEGSASGPKRAVAVRGDIDALPIQETRDDLPYQSHVEGVMHACGHDLHASIAMGV
ALAFHRMRNNFAGKLRVFFQPAEEAEPLGGRTVLEERLLEGFDNAVGFHVTPSIQVGKFG
AREGAVSKSSDQFKVTVSGSAAHGSTPHNGIDAITIAAAFVNEVQKVISREVPVDDRSVI
TIGTIHGGEATNIICPKVVMEGTIRTTNPELRPLLSQRVREIAEGVAALHRGKAEVVVTS
GEPAVINDPEMVRLFRDAVSDMAGSDALTQGKAISGSDDFGFYSQCIPSIYFWFGSGEPG
NESGVHTPTFAVSDDVLIPTTELAVKYCFDLLHGQSAR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory