Comparing WP_197942621.1 NCBI__GCF_000711315.1:WP_197942621.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
O14289 3-isopropylmalate dehydratase; Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase; EC 4.2.1.33 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
62% identity, 99% coverage: 3:469/473 of query aligns to 9:479/758 of O14289
Sites not aligning to the query:
4kp1A Crystal structure of ipm isomerase large subunit from methanococcus jannaschii (mj0499) (see paper)
36% identity, 93% coverage: 27:468/473 of query aligns to 28:423/423 of 4kp1A
4nqyA The reduced form of mj0499 (see paper)
35% identity, 93% coverage: 27:466/473 of query aligns to 27:408/409 of 4nqyA
P39533 Homocitrate dehydratase, mitochondrial; Aconitase 2; EC 4.2.1.- from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
29% identity, 79% coverage: 88:460/473 of query aligns to 151:505/789 of P39533
Sites not aligning to the query:
P19414 Aconitate hydratase, mitochondrial; Aconitase; Citrate hydro-lyase; EC 4.2.1.3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
29% identity, 75% coverage: 108:460/473 of query aligns to 167:500/778 of P19414
Sites not aligning to the query:
P20004 Aconitate hydratase, mitochondrial; Aconitase; Citrate hydro-lyase; EC 4.2.1.3 from Bos taurus (Bovine) (see 2 papers)
30% identity, 77% coverage: 99:460/473 of query aligns to 160:503/780 of P20004
Sites not aligning to the query:
P16276 Aconitate hydratase, mitochondrial; Aconitase; Citrate hydro-lyase; EC 4.2.1.3 from Sus scrofa (Pig) (see 3 papers)
30% identity, 77% coverage: 99:460/473 of query aligns to 160:503/781 of P16276
Sites not aligning to the query:
5acnA Structure of activated aconitase. Formation of the (4fe-4s) cluster in the crystal (see paper)
30% identity, 77% coverage: 99:460/473 of query aligns to 133:476/754 of 5acnA
Sites not aligning to the query:
8acnA Crystal structures of aconitase with isocitrate and nitroisocitrate bound (see paper)
30% identity, 77% coverage: 99:460/473 of query aligns to 132:475/753 of 8acnA
Sites not aligning to the query:
1fghA Complex with 4-hydroxy-trans-aconitate (see paper)
30% identity, 77% coverage: 99:460/473 of query aligns to 132:475/753 of 1fghA
Sites not aligning to the query:
1amjA Steric and conformational features of the aconitase mechanism (see paper)
30% identity, 77% coverage: 99:460/473 of query aligns to 132:475/753 of 1amjA
Sites not aligning to the query:
1amiA Steric and conformational features of the aconitase mechanism (see paper)
30% identity, 77% coverage: 99:460/473 of query aligns to 132:475/753 of 1amiA