Comparing WP_211240420.1 NCBI__GCF_000527155.1:WP_211240420.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
Q6LX42 Sodium/alanine symporter AgcS; Alanine permease; Alanine/glycine:cation symporter from Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL) (see paper)
49% identity, 93% coverage: 25:492/505 of query aligns to 6:447/453 of Q6LX42
6csfM Crystal structure of sodium/alanine symporter agcs with d-alanine bound (see paper)
49% identity, 91% coverage: 34:492/505 of query aligns to 1:427/431 of 6csfM
6cseM Crystal structure of sodium/alanine symporter agcs with l-alanine bound (see paper)
49% identity, 91% coverage: 34:492/505 of query aligns to 1:427/431 of 6cseM
>WP_211240420.1 NCBI__GCF_000527155.1:WP_211240420.1
MNFLDEFGSKLEEWVNSATAPIEGVVSATSTFVWGPFLLIPLLLGAGIILTSALGGIQFR
RLGYGLWLAFFKRHEARDTEGDISHYQALSVALAATVGVGNIGGVAAAFTLGGPGALFWM
WITGLLGMATKYSEALLGVKYRTVNEHGEQSGGPQQYLTRGLADITYLSEPVKKRIGAIL
GLSFAVFGVVASFGIGNALQSGNVSSAITGQWEGVDNSLVGIIMMVVAGLVILGGIKWIG
RVTSLFVPFMIVLYIAGTLAVLILNIDQLGAALNSIFSDAFTGSSAVGGFVGAGIITVVR
AGVARGIFSNESGLGTGGIAAAAAKTDAAPRQAMVSMTQTFIDTIIVVTLTGLTIAVTGV
LGTERVNDDGETVMVEGADLTRLAFEEGLSGWGDAGGLIVALAVVLFAMSTIFGWSYYGE
KCLERFAGDRFKLLYRTLFVLVVFVGAVTSLDVLWGISDVFNGLMAIPNLIGLIMLTPIL
RKETSKFFSNRDWRLLPTDALEKNG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory