Comparing YP_001312977.1 NCBI__GCF_000017145.1:YP_001312977.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q168G2 Propionyl-CoA carboxylase beta chain; EC 6.4.1.3 from Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) (see paper)
80% identity, 100% coverage: 1:510/510 of query aligns to 1:510/510 of Q168G2
3n6rB Crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) (see paper)
80% identity, 99% coverage: 5:510/510 of query aligns to 1:506/506 of 3n6rB
8pn7A Engineered glycolyl-coa carboxylase (g20r variant) with bound coa (see paper)
73% identity, 99% coverage: 5:510/510 of query aligns to 1:506/506 of 8pn7A
7ybuP Human propionyl-coenzyme a carboxylase
64% identity, 100% coverage: 3:510/510 of query aligns to 2:507/507 of 7ybuP
1xnyA Biotin and propionyl-coa bound to acyl-coa carboxylase beta subunit from s. Coelicolor (pccb) (see paper)
57% identity, 99% coverage: 5:510/510 of query aligns to 9:521/521 of 1xnyA
3ib9A Propionyl-coa carboxylase beta subunit, d422l (see paper)
57% identity, 99% coverage: 5:510/510 of query aligns to 9:521/521 of 3ib9A
8sgxE Leishmania tarentolae propionyl-coa carboxylase (alpha-4-beta-6) (see paper)
57% identity, 95% coverage: 27:510/510 of query aligns to 8:489/489 of 8sgxE
1vrgA Crystal structure of propionyl-coa carboxylase, beta subunit (tm0716) from thermotoga maritima at 2.30 a resolution
55% identity, 100% coverage: 1:510/510 of query aligns to 3:515/515 of 1vrgA
5iniF Structural basis for acyl-coa carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics (see paper)
54% identity, 99% coverage: 5:510/510 of query aligns to 6:511/511 of 5iniF
1on3E Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
49% identity, 100% coverage: 1:509/510 of query aligns to 9:519/520 of 1on3E
1on3C Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
49% identity, 100% coverage: 1:509/510 of query aligns to 5:509/510 of 1on3C
4g2rB Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor haloxyfop from mycobacterium tuberculosis (see paper)
39% identity, 85% coverage: 62:497/510 of query aligns to 13:440/441 of 4g2rB
6tzvA Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor phenyl-cyclodiaone from mycobacterium tuberculosis
38% identity, 85% coverage: 62:497/510 of query aligns to 14:425/426 of 6tzvA
6prwA Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p derivative from mycobacterium tuberculosis
38% identity, 85% coverage: 62:497/510 of query aligns to 14:425/426 of 6prwA
6pk2A Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p derivative from mycobacterium tuberculosis
38% identity, 85% coverage: 62:497/510 of query aligns to 14:425/426 of 6pk2A
6p7uA Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p from mycobacterium tuberculosis
38% identity, 85% coverage: 62:497/510 of query aligns to 14:425/426 of 6p7uA
6tzvC Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor phenyl-cyclodiaone from mycobacterium tuberculosis
38% identity, 85% coverage: 62:497/510 of query aligns to 14:409/410 of 6tzvC
6prwC Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p derivative from mycobacterium tuberculosis
38% identity, 85% coverage: 62:497/510 of query aligns to 14:409/410 of 6prwC
6pk2C Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p derivative from mycobacterium tuberculosis
38% identity, 85% coverage: 62:497/510 of query aligns to 14:409/410 of 6pk2C
6p7uC Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p from mycobacterium tuberculosis
38% identity, 85% coverage: 62:497/510 of query aligns to 14:409/410 of 6p7uC
>YP_001312977.1 NCBI__GCF_000017145.1:YP_001312977.1
MRAILEQVEARRAEARVGGGERRIAAQHGKGKLTARERIDVLLDEGSFEEYDMYVTHRCV
DFDMGSQKIAGDGVVTGWGTINGRQVYVFSQDFTVLGGSLSETHAQKICKIMDMAARNGA
PVIGLNDSGGARIQEGVSSLAGYAEVFRRNAEVSGVIPQISVIMGPCAGGAVYSPAMTDF
IFMVRDSSYMFVTGPDVVKTVTNEIVTAEELGGARTHTTKSSVADGAYENDIEALEHVRL
LFDFLPLNNREKPPVRPFHDDPGRIEMRLDSLIPDSAAKPYDMKELIIAIADEGDFFELQ
ASFARNIITGFIRIEGQTVGVVANQPLVLAGCLDIDSSRKAARFVRFCDAFSIPILTLVD
VPGFLPGTAQEYGGVIKHGAKLLFAYSQATVPMVTLITRKAYGGAYDVMASKHIGADVNY
AWPTAEIAVMGAKGATEILYRSELGDKEKIAARTKEYEERFANPFVAAERGFIDEVIMPH
SSRRRIARAFASLRSKQLETRWRKHDTIPL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory