Comparing YP_001325872.1 NCBI__GCF_000017145.1:YP_001325872.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1j32A Aspartate aminotransferase from phormidium lapideum
30% identity, 91% coverage: 20:381/396 of query aligns to 18:380/388 of 1j32A
6f77A Crystal structure of the prephenate aminotransferase from rhizobium meliloti (see paper)
32% identity, 93% coverage: 23:392/396 of query aligns to 21:399/399 of 6f77A
Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
32% identity, 93% coverage: 23:392/396 of query aligns to 22:400/400 of Q02635
Sites not aligning to the query:
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
31% identity, 93% coverage: 15:382/396 of query aligns to 14:379/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
31% identity, 93% coverage: 15:382/396 of query aligns to 14:379/382 of 1bjwA
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
31% identity, 93% coverage: 15:382/396 of query aligns to 14:379/385 of Q56232
Sites not aligning to the query:
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
31% identity, 93% coverage: 15:382/396 of query aligns to 14:379/382 of 1b5oA
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
32% identity, 92% coverage: 20:382/396 of query aligns to 19:379/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
32% identity, 92% coverage: 20:382/396 of query aligns to 19:379/382 of 1gc3A
Sites not aligning to the query:
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
27% identity, 92% coverage: 28:392/396 of query aligns to 31:402/402 of P14909
Sites not aligning to the query:
6f35A Crystal structure of the aspartate aminotranferase from rhizobium meliloti (see paper)
30% identity, 96% coverage: 8:389/396 of query aligns to 6:400/400 of 6f35A
P58350 Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
30% identity, 96% coverage: 8:389/396 of query aligns to 16:410/410 of P58350
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
30% identity, 90% coverage: 27:381/396 of query aligns to 20:378/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
30% identity, 90% coverage: 27:381/396 of query aligns to 20:378/388 of 1gd9A
Q58097 (5-formylfuran-3-yl)methyl phosphate transaminase; 4-HFC-P:alanine aminotransferase; EC 2.6.1.108 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
28% identity, 91% coverage: 24:384/396 of query aligns to 21:367/370 of Q58097
2o0rA The three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis (see paper)
37% identity, 89% coverage: 35:385/396 of query aligns to 27:384/385 of 2o0rA
Sites not aligning to the query:
1v2fA Crystal structure of t.Th hb8 glutamine aminotransferase complex with 3-phenylpropionate (see paper)
35% identity, 88% coverage: 35:381/396 of query aligns to 28:364/368 of 1v2fA
Sites not aligning to the query:
1v2eA Crystal structure of t.Th hb8 glutamine aminotransferase complex with a-keto-g-methylthiobutyrate (see paper)
35% identity, 88% coverage: 35:381/396 of query aligns to 28:364/368 of 1v2eA
Sites not aligning to the query:
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
27% identity, 95% coverage: 6:381/396 of query aligns to 10:378/384 of 1o4sB
8wkjA The crystal structure of aspartate aminotransferases lpg0070 from legionella pneumophila (see paper)
28% identity, 89% coverage: 31:381/396 of query aligns to 30:386/391 of 8wkjA
>YP_001325872.1 NCBI__GCF_000017145.1:YP_001325872.1
MRYASITSRLADLGSGKWTLHVRARQLKASGADIIELTIGEPDLPPDPALLEECQRAMNA
GRYRYSNGRGEPAVVAALTEKYRRRRSGVTKENILCFPGTQTALFAVMFGLAEAGDGVLV
GDPLYATYEGVIRSTGAHPVFVPLNPQHGFHMQAEDLEKAVTPECRVLLLNTPHNPTGAV
LTPEEIAAIGAVARRHDLWIVCDEVYEELVFDAAFASPFDNPDLAERTVVVSSISKSHAA
TGFRSGWAVGPAEFTERLLPISETMLFGQQPFIADMTAYALTHEIGTARQMRESYSHRAR
LTIDGLAGVPGVSVLPPEAGMFALIDVSGTSLSGEAFAWALLEEEGVAVMPGSSFGDTAR
NFLRVSLTVPDDVIEEACRRIAALALRCTACRERRA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory