SitesBLAST

Comparing YP_004140448.1 NCBI__GCF_000185905.1:YP_004140448.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>YP_004140448.1 NCBI__GCF_000185905.1:YP_004140448.1
MAVTVSPERDTVATPMQRALREALYAAAISFGLFVLFIGLKTGQNISNELVLTTRWGLLA
AVVIATAVGRFLYVAYGQPFLANQKITDVATGLLPASVASRFFQLPAFIVALVAAVVLFA
VNSSLVGWVGAEPAGYLQFLRALSVIYVLACVIYYFRGFIHANFTKLGIAALILYPILVV
AILSLMSWSFVGGLQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGA
YAYALLGTQYGLSFWILLPAAGAMAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLVLI
NWREVTNGSAGISGIPKVTFFGLMTFNVSDPNYVAKVLHLATSSAYYKIFLYYLILALAL
LTAFVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGAFFAAR
QGFVSPESFVFLESAIILAIVVLGGMGSLVGIAVAAMVMIGGTEALRELDFLKQVFGPDF
TPELYRMLLFGMAMVIVMLWKPRGFVGSREPTAFLKERKAVSSSFTKEGHG

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.