Comparing YP_004142526.1 NCBI__GCF_000185905.1:YP_004142526.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
8wm8B Cryo-em structure of cyanobacterial nitrate/nitrite transporter nrtbcd in complex with nitrate (see paper)
27% identity, 56% coverage: 99:241/257 of query aligns to 106:251/265 of 8wm8B
>YP_004142526.1 NCBI__GCF_000185905.1:YP_004142526.1
MRPLHPVSPGIRTVLGISFFVLFVAFWAWITLGGHVNRIFLADPLSMLRDGWRLLVEDRF
WLDVLITIWRVFGGFLLASVVAVPLGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLIL
WAGIGELEKLLVIFVGSVFQIVLIIAVKVGGTRRDLVEAAYTLGSTNSGIVNRVIMPANA
PEIAETLRLVLGWAWTYVIVAELIGSSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLS
DFAFKAFNRWLFPWSLA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory