Comparing YP_004143517.1 NCBI__GCF_000185905.1:YP_004143517.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q9WVL0 Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Mus musculus (Mouse)
37% identity, 62% coverage: 24:161/221 of query aligns to 34:168/216 of Q9WVL0
2cz2A Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from mus musculus (form-1 crystal)
37% identity, 62% coverage: 24:161/221 of query aligns to 31:165/212 of 2cz2A
Sites not aligning to the query:
2v6kA Structure of maleyl pyruvate isomerase, a bacterial glutathione-s- transferase in zeta class, in complex with substrate analogue dicarboxyethyl glutathione (see paper)
32% identity, 73% coverage: 1:161/221 of query aligns to 3:171/214 of 2v6kA
2jl4A Holo structure of maleyl pyruvate isomerase, a bacterial glutathione- s-transferase in zeta class (see paper)
32% identity, 73% coverage: 1:161/221 of query aligns to 1:169/212 of 2jl4A
O86043 Maleylpyruvate isomerase; MPI; Naphthalene degradation protein L; EC 5.2.1.4 from Ralstonia sp. (see paper)
32% identity, 73% coverage: 1:161/221 of query aligns to 1:169/212 of O86043
Sites not aligning to the query:
1fw1A Glutathione transferase zeta/maleylacetoacetate isomerase (see paper)
37% identity, 63% coverage: 22:161/221 of query aligns to 28:164/208 of 1fw1A
Sites not aligning to the query:
O43708 Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens (Human) (see 10 papers)
37% identity, 63% coverage: 22:161/221 of query aligns to 32:168/216 of O43708
4kaeA Crystal structure of maleylacetoacetate isomerase from anaeromyxobacter dehalogenans 2cp-1, target efi-507175, with bound dicarboxyethyl glutathione and citrate in the active site
37% identity, 59% coverage: 39:169/221 of query aligns to 44:178/220 of 4kaeA
Sites not aligning to the query:
4kdyA Crystal structure of maleylacetoacetate isomerase from anaeromyxobacter dehalogenans 2cp-1, target efi-507175, with bound gsh in the active site
37% identity, 59% coverage: 39:169/221 of query aligns to 46:180/222 of 4kdyA
Sites not aligning to the query:
4gltA Crystal structure of glutathione s-transferase mfla_2116 (target efi- 507160) from methylobacillus flagellatus kt with gsh bound
27% identity, 71% coverage: 1:156/221 of query aligns to 7:162/208 of 4gltA
Sites not aligning to the query:
3touA Crystal structure of glutathione transferase (target efi-501058) from ralstonia solanacearum gmi1000 with gsh bound
25% identity, 71% coverage: 1:156/221 of query aligns to 2:158/212 of 3touA
4qq7A Crystal structure of putative stringent starvation protein a from burkholderia cenocepacia with bound glutathione
29% identity, 73% coverage: 1:161/221 of query aligns to 3:159/204 of 4qq7A
4hojA Crystal structure of glutathione transferase homolog from neisseria gonorrhoeae, target efi-501841, with bound glutathione
26% identity, 79% coverage: 1:175/221 of query aligns to 1:166/197 of 4hojA
Sites not aligning to the query:
3vlnA Human glutathione transferase o1-1 c32s mutant in complex with ascorbic acid (see paper)
26% identity, 90% coverage: 1:199/221 of query aligns to 22:211/239 of 3vlnA
5evoA Structure of dehydroascrobate reductase from pennisetum americanum in complex with two non-native ligands, acetate in the g-site and glycerol in the h-site (see paper)
30% identity, 57% coverage: 38:164/221 of query aligns to 49:160/213 of 5evoA
Sites not aligning to the query:
4mk3A Crystal structure of a glutathione transferase family member from cupriavidus metallidurans ch34, target efi-507362, with bound glutathione sulfinic acid (gso2h)
26% identity, 71% coverage: 1:156/221 of query aligns to 1:157/203 of 4mk3A
P78417 Glutathione S-transferase omega-1; GSTO-1; Glutathione S-transferase omega 1-1; GSTO 1-1; Glutathione-dependent dehydroascorbate reductase; Monomethylarsonic acid reductase; MMA(V) reductase; S-(Phenacyl)glutathione reductase; SPG-R; EC 2.5.1.18; EC 1.8.5.1; EC 1.20.4.2 from Homo sapiens (Human) (see 5 papers)
25% identity, 90% coverage: 1:199/221 of query aligns to 24:213/241 of P78417
Sites not aligning to the query:
4yqvA Glutathione s-transferase omega 1 bound to covalent inhibitor c4-10 (see paper)
25% identity, 90% coverage: 1:199/221 of query aligns to 20:209/237 of 4yqvA
Sites not aligning to the query:
4yqmA Glutathione s-transferase omega 1 bound to covalent inhibitor c1-27 (see paper)
25% identity, 90% coverage: 1:199/221 of query aligns to 20:209/237 of 4yqmA
1eemA Glutathione transferase from homo sapiens (see paper)
25% identity, 90% coverage: 1:199/221 of query aligns to 20:209/237 of 1eemA
>YP_004143517.1 NCBI__GCF_000185905.1:YP_004143517.1
MKLYSRPLSPYSSIVRALAYIKDVPLKIIAPPPGFPIPEEFRAISPMNRIPVLITGSGET
IVESVVIAEYLEERFPEPALLPPDSKDRALVRMFARITDLDVLTPLMKLFELHSVPKRNN
AEIDAQFARLHHGLAAIEARMAQGPFALGDDISFADAWLTPTRFIFNNFRAMTGRHDLLD
AYPKFDAYQQIASQHPALSRVWGEMTDGLKIFLSELEMGAA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory