Comparing YP_004145044.1 NCBI__GCF_000185905.1:YP_004145044.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2ordA Crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution
44% identity, 96% coverage: 6:389/399 of query aligns to 11:393/393 of 2ordA
Q9X2A5 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
44% identity, 96% coverage: 6:389/399 of query aligns to 3:385/385 of Q9X2A5
4jevB N-acetylornithine aminotransferase from s. Typhimurium complexed with gabaculine
45% identity, 91% coverage: 20:382/399 of query aligns to 26:391/402 of 4jevB
P40732 Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
45% identity, 91% coverage: 20:382/399 of query aligns to 31:396/405 of P40732
4adbB Structural and functional study of succinyl-ornithine transaminase from e. Coli (see paper)
43% identity, 95% coverage: 9:387/399 of query aligns to 15:396/401 of 4adbB
4addA Structural and functional study of succinyl-ornithine transaminase from e. Coli (see paper)
43% identity, 95% coverage: 9:387/399 of query aligns to 15:396/400 of 4addA
4jewA N-acetylornithine aminotransferase from s. Typhimurium complexed with l-canaline
44% identity, 91% coverage: 20:382/399 of query aligns to 26:386/397 of 4jewA
Sites not aligning to the query:
2pb0A Structure of biosynthetic n-acetylornithine aminotransferase from salmonella typhimurium: studies on substrate specificity and inhibitor binding (see paper)
44% identity, 91% coverage: 20:382/399 of query aligns to 20:380/389 of 2pb0A
O66442 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Aquifex aeolicus (strain VF5)
42% identity, 95% coverage: 4:383/399 of query aligns to 2:373/376 of O66442
2eh6A Crystal structure of acetylornithine aminotransferase from aquifex aeolicus vf5
42% identity, 95% coverage: 4:383/399 of query aligns to 1:372/375 of 2eh6A
8ht4B Crystal structure of acetylornithine aminotransferase complex with plp from corynebacterium glutamicum (see paper)
44% identity, 97% coverage: 6:394/399 of query aligns to 10:390/390 of 8ht4B
Q9M8M7 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
42% identity, 93% coverage: 9:379/399 of query aligns to 72:446/457 of Q9M8M7
Sites not aligning to the query:
3nx3A Crystal structure of acetylornithine aminotransferase (argd) from campylobacter jejuni
38% identity, 97% coverage: 4:389/399 of query aligns to 2:388/388 of 3nx3A
A0QYS9 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
39% identity, 95% coverage: 4:384/399 of query aligns to 9:381/390 of A0QYS9
P9WPZ7 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
39% identity, 93% coverage: 4:375/399 of query aligns to 17:382/400 of P9WPZ7
Sites not aligning to the query:
7nncC Crystal structure of mycobacterium tuberculosis argd with prosthetic group pyridoxal-5'-phosphate and 6-methoxyquinoline-3-carboxylic acid
39% identity, 93% coverage: 4:375/399 of query aligns to 11:376/391 of 7nncC
7nn4A Crystal structure of mycobacterium tuberculosis argd with prosthetic group pyridoxal 5'-phosphate and 3-hydroxy-2-naphthoic acid.
39% identity, 93% coverage: 4:375/399 of query aligns to 11:376/391 of 7nn4A
Q5SHH5 [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
37% identity, 93% coverage: 15:384/399 of query aligns to 29:392/395 of Q5SHH5
1wkhA Acetylornithine aminotransferase from thermus thermophilus hb8
36% identity, 93% coverage: 15:384/399 of query aligns to 21:384/387 of 1wkhA
Sites not aligning to the query:
1wkgA Acetylornithine aminotransferase from thermus thermophilus hb8
36% identity, 93% coverage: 15:384/399 of query aligns to 21:384/387 of 1wkgA
Sites not aligning to the query:
>YP_004145044.1 NCBI__GCF_000185905.1:YP_004145044.1
MSGSALYETFARAPLAFDHGEGTWLITDKGERYLDFAGGIAVNSLGHSHPHLVAALTEQA
AKLWHVSNLYEIPGQSRLGERLADATFADKVFFTNSGAEALECAIKTARRYHFVKGHPER
FRIITFEGAFHGRTLATIAAGGQYKYLEGFGPKVEGFDQVGFDDIDAAEKAITPETAAIL
IEPVQGEGGIRPVPTQSLKRLRQLCEQHGLLLIYDEVQCGIGRTGKLFAHEWSGVTPDIM
AIAKGIGGGFPMGACLATDEAAVGMTAGVHGTTFGGNPLAMAVGNAVLDVVLEDGFLEDV
QRKALLMKQGLASVADEFPEIIEDIRGAGLMLGLKCAMPNTKVNMALRDQHLLAVPAGDN
VIRLLPPLTVTDAEIHDALNRIRAGAKGLAEAIASAAAK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory