Sites on a Tree

 

Information about 10270655_87_292

Unaligned length: 206

Alignment length: 716

Description in the alignment: single domain, from Salinibacter ruber

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>10270655_87_292
GWTLLFDGETAAGWRGYNDEDFPDTGWTIEDGVLTIEGAGGGVSGSGGDIITTETYEDFV
LKLEWKISEGGNSGIFYRAIEQPDQPIYWSAPEMQILDNANHPDAGRGENGNRKAGSLYD
LIPADPQTFSGHGEWQDVMIVVEGAHVEHWLNGQKVLEYETWTPGWYRMIRDSKFRTHPE
FGDAREGHIGLQDHGTTAHFRNIKIK

Aligned sequence

>10270655_87_292
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWTLLF-D-GE--TA-AG-------W
R---GYNDEDF--PDTGW------------------------------------TIED-G
---------------------------VLTI------------------EGAGGGVSGSG
G-DIIT-----T-----E--TY-E-DFVLKLEWKI---------------SE-GG-----
------------------------NSGIFYRAI---------------------------
-EQPDQ---PIYWSAP-EMQILD------NANHPDA---------------GRGENGNRK
AGSLYDL------------------------------------------IP---------
---AD--PQTFSGHGEWQDVMI--VV-E-GAH---------------VE--H-WLN-GQK
VLEYETWTPGWYRMIRDSKFR-------------THPEFGDAREGHIGLQ--DHG-----
-------T--------------------TAH--FRNIKIK----------------

Back to tree

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory