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Information about 10343720_38_183

Unaligned length: 146

Alignment length: 716

Description in the alignment: single domain, from Allochromatium vinosum DSM 180

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>10343720_38_183
WEQSADELIARGSTTDPGYLVSRELYGSLRLRLEVWIEPETNSGVFVGCTPGEAISPTAC
YEINLWDRHPKQEWRTGALVGISPPLNHVDTLGRWNRLEILIEEKRMRVWINDTLTADWM
TEAPRTGRLALQFGGAGAVHVRHLTL

Aligned sequence

>10343720_38_183
------------------------------------------------------------
------------------------------------------------------------
---------------------------WEQSADE--------------------------
------------------------------------------------------------
---------------------------LIA-----------------------RGSTTDP
G-YLVS-----R-----E--LY-G-SLRLRLEVWI---------------EP-ET-----
------------------------NSGVFVGCT---------------------------
--PGEA---ISPTACY-EINLWD------RHPK-----------------------QEWR
TGALVG-----------------------------------------------IS-----
---PP--LNHVDTLGRWNRLEI--LI-E-EKR---------------MR--V-WIN-DTL
TADWMTEAP---------------------------------RTGRLALQ--FGG-----
------AG--------------------AVH--VRHLT--L---------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory