Information about 10356341_141_326

Unaligned length: 186

Alignment length: 716

Description in the alignment: single domain, from Coraliomargarita akajimensis DSM 45221

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>10356341_141_326
GATVLFDGSSLDAWHHQPDQPATWEIIGDAVQVATKSDPQNKARGIGGNILTKEKFSSMR
FHMEFRYPVEANRSGQNRGNSGLFFRGIGEVQILNSYTTAGYWNEAGAIYKRVPAKVNAA
GPPLAWQTYDVELQLPEAGGQTAMMTVHLNGRLLHNKMEIPCSVTEVDIMLQDHSNPLQF
RNIWLK

Aligned sequence

>10356341_141_326
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GATVLF-D-GS--SL-DA-------W
H---HQP--DQ---PATW------------------------------------EIIG-D
---------------------------AVQVAT---------------KSDPQNKARGIG
G-NILT-----K-----E--KF-S-SMRFHMEFRYPVEA-------NRSGQN-RG-----
------------------------NSGLFFRGI---------------------------
---------------G-EVQILN------SYTT---------------------AGYWNE
AGAIY----------------------------------------------KRVP-----
---AK--VNAAGPPLAWQTYDV--EL-Q-LPEAGG--------QTAMMT--V-HLN-GRL
LHNKMEIPCSV-------------------------------TEVDIMLQ--DHS-----
-------N--------------------PLQ--FRNIWLK----------------

Back to tree