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Information about 10359430_45_269

Unaligned length: 225

Alignment length: 716

Description in the alignment: single domain, from Coraliomargarita akajimensis DSM 45221

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>10359430_45_269
YTALFNGEDLSGWNPVLRVPTDPRADEVFQVEDGAIHVFKNFPQDYGVTERRNATHGMLF
TEQSFSRFILRFEYKWGDILLNNYATYQYDAGVYYHISGQGVWPHGLEYQVRYDHVEDRN
HTGDFWASSVQIDWTSADGEHFAHPADGGQIVPRKRGEHRALKGASVHKLDGEWNRCEVI
VMGSDYAIHKLNGQVVNVGTNLTAGEGVIGLQAETAEIFYRNIEI

Aligned sequence

>10359430_45_269
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------YTALF-N-GE--DL-SG-------W
N---PVLRVPT--DPRADE---------------------------------VFQVED-G
---------------------------AIHVFKNF-----------PQDYGVTERRNATH
G-MLFT-----E-----Q--SF-S-RFILRFEYKWGD----------ILLN---NYAT--
---------------------YQYDAGVYYHIS---------------------------
----GQ---GVWPHGL-EYQVRY------DHVE-----------------------DRNH
TGDFWASSVQIDWTSADGEHF--------------AHPADGGQIVPRKRG--EHRA----
--LKG--ASVHKLDGEWNRCEV--IV-M-GSD---------------YA-IH-KLN-GQV
VNVGTNLTA---------------------------------GEGVIGLQ--AET-----
-------A--------------------EIF--YRNIEI-----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory