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Information about 10981894_25_253

Unaligned length: 229

Alignment length: 716

Description in the alignment: single domain, from Leadbetterella byssophila 4M15, DSM 17132

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>10981894_25_253
KAIFNGKNLKGWTPKIHHHEYGDNYANTYRVKDGVIQVRYDGYDSFNERYGHLFYKKPYE
NFHLSLEYKFTGIWRTDAPSYTHLNSGVMFHSQDPRTILKEQDWPISVEMQFLAEEKPGV
PRPTGNMCSPGTDVVYQGEKDPRHCIDSNSPTIKPGEWVKAELIVYGDSLIRHIINGQVV
LEYTKPTMGGGVVNGADPKIFIPGTPLKSGYIGLQSEGQEIDFRNIKIK

Aligned sequence

>10981894_25_253
------------------------------------------------------------
------------------------------------------------------------
---------------------------------K---AIF-N-GK--NL-KG-------W
T---PKIHHHE---YGDNYA-------------------------------NTYRVKD-G
---------------------------VIQVR-----------------YDGYDSFNERY
G-HLFY-----K-----K--PY-E-NFHLSLEYKFTGI--------WRTDA---PSY---
---------------------THLNSGVMFHSQD-------------------------P
RTILKE---QDWPISV-EMQFLA------EEKP----------------------GVPRP
TGNMCSPGTDVV--------------------------------YQGEKDP---RH----
-CIDS--NSPTIKPGEWVKAEL--IV-Y-GDS---------------LI-RH-IIN-GQV
VLEYTKPTMGGGVVNGADPKI--------------FIPGTPLKSGYIGLQ--SEG-----
-------Q--------------------EID--FRNIKIK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory