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Information about 11000386_925_1125

Unaligned length: 201

Alignment length: 716

Description in the alignment: with other domain, near sugar dehydrogenase, from Alistipes finegoldii AHN 2437, DSM 17242

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>11000386_925_1125
GYEVLFDGRSLHKWTGNTVNYVPLDGTIDVTASYGGSGNLYTVKEYGDFDLRFEFRFLRR
GVNNGIGIRTPMGVDAAYHGMEIQILDHDAPIYKNLRIYQQHGSVYGIIPAQEHVVFGDL
GTWNTMEIHAVGDRITVTVNGRVILDGDIRQACKGHNVSEDGSKKNPYTVDGKNHPGLFN
KKGHLGLLGHGAGIQFRNLRV

Aligned sequence

>11000386_925_1125
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GYEVLF-D-GR--SL-HK-------W
T---GNTVNYV---PL-----------------------------------------D-G
---------------------------TID----------------------VTASYGGS
G-NLYT-----V-----K--EY-G-DFDLRFEFRF---------------LR-RG-----
-----------------------VNNGIGIRTP---------------------------
---MGV---DAAYHGM-EIQILD------HDAPIY-----------------KNLRIYQQ
HGSVYGI------------------------------------------IP---A-----
---QE--HVVFGDLGTWNTMEI--HA-V-GDR---------------IT--V-TVN-GRV
ILDGDIRQACKGHNVSEDGSKKNPY-----TVDGKNHPGLFNKKGHLGLL--GHG-----
-------A--------------------GIQ--FRNLRV-----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory