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Information about 11023056_44_295

Unaligned length: 252

Alignment length: 716

Description in the alignment: single domain, from Cellulophaga algicola IC166, DSM 14237

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>11023056_44_295
TNMFDAELTNWEVWIGAVHTSVDLDVDKFDNVQIGKPLGLHKDLKKVFSVQEENGEAILK
ITGEIYGGLTTKKEYGNYHLSVQFKWGDKKWEPRLNTKRDSGILYHAKGPHGAFWNVWMA
SAEFQVQEGDCGDFIALGDVYGDVPSDKKMKSDGKPYFVYNPEGPLIPLKWGADFESGQA
SKATLHEKPHGEWNRLEIYCLGNESLHVVNGIVVNRVQNIRYDIDGKTISVTKGKIQLQS
EAAEVYYKDLTL

Aligned sequence

>11023056_44_295
------------------------------------------------------------
------------------------------------------------------------
---------------------------------T---NMF-D-A---EL-TN-------W
E---VWIGAVH---TSVDLDVDKFDNVQIGK---------PLGLHKDLKKVFSVQEEN-G
---------------------------EAI----------------------LKITGEIY
G-GLTT-----K-----K--EY-G-NYHLSVQFKW---------------GD-KKWEPR-
-------------------LNTKRDSGILYHAKG--------------------------
PHGAFW---NVWMASA-EFQVQE------GDCG-----------------------DFIA
LGDVYGDVPSDKKMKSDGKPYFV----------YNPEGPLIPLKWGADFESGQAS-----
---KA--TLHEKPHGEWNRLEI--YC-L-GNE---------------SL--H-VVN-GIV
VNRVQNIRYDIDGKTI------------------------SVTKGKIQLQ--SEA-----
-------A--------------------EVY--YKDLT--L---------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory