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Information about 11127178_250_458

Unaligned length: 209

Alignment length: 716

Description in the alignment: tandem domain, near sugar dehydrogenase, from Aquiflexum balticum BA160, DSM 16537

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>11127178_250_458
GWKLLFNGLNSEGWKGAYKETFPEKGWHIKDGILMVEKADGGESSNFGDIVTVEKYSAFD
LAFDFKMTEGANSGVKYFVTLSEGNKGSAIGLEYQILDDERHPDAKMGIEGNRTLASLYD
LIKANKQPRFVKGPGEWNKGRVVVYPDNKVEHYLNGVKVVEYVRGSQEYRDLVAISKYKI
WENFGEAPEGHILLQDHGDEVHFKNIKIK

Aligned sequence

>11127178_250_458
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWKLLF-N-GL--NS-EG-------W
K---GAYKETF--PEKGW------------------------------------HIKD-G
---------------------------ILMV------------------EKADGGESSNF
G-DIVT-----V-----E--KY-S-AFDLAFDFKM---------------TE-GA-----
------------------------NSGVKYFVT---------------------------
-LSEGN---KGSAIGL-EYQILD------DERHPDA---------------KMGIEGNRT
LASLYDL------------------------------------------IK--AN-----
---KQ--PRFVKGPGEWNKGRV--VV-Y-PDN--------------KVE--H-YLN-GVK
VVEYVRGSQEYRDLVAISKYK-------------IWENFGEAPEGHILLQ--DHG-----
-------D--------------------EVH--FKNIKIK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory