Information about 11141775_41_262

Unaligned length: 222

Alignment length: 716

Description in the alignment: single domain, from Runella slithyformis LSU4, DSM 19594

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

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Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

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Sequence

>11141775_41_262
GFVQIFDGKTLNGWDGDPTYWRAENGNLVGEITPTTLLKTNSFIIWKGGEPADFELKGEF
NITKAGNSGINYRSDRLTDIPFALRGYQADIDGNNRYTGQNYEERKRTTLAYRGQKTVIN
PQTGTFTPEAVRAKVKSNAWTDLKVTGSLGSSDSLKTLIKSEDWNEFHLIVKGNRLQHYI
NGVLMSEVTDNDAVNGKSKGLLGVQVHVGPPMKVQYRNLRLK

Aligned sequence

>11141775_41_262
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GFVQIF-D-GK--TL-NG-------W
D---GDPTYWR---A-----------------------------------------EN-G
---------------------------NLVG------------------EITPTTLLKTN
S-FIIW-----K-----G-GEP-A-DFELKGEFNI---------------TK-AG-----
------------------------NSGINYRSD---------------------------
-RLTDI---PFALRGY-QADIDG---------------------------------NNRY
TGQNYEERKRTTLAYRGQKTVINPQTGTFTPEAVRAKVKSNAWTDLKVTGSLGSS-----
---DS--LKTLIKSEDWNEFHL--IV-K-GNR---------------LQ--H-YIN-GVL
MSEVTDNDAVNGK-----------------------------SKGLLGVQ--VHVG----
-----PPM--------------------KVQ--YRNLRLK----------------

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