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Information about 11185153_25_218

Unaligned length: 194

Alignment length: 716

Description in the alignment: single domain, from Ornithobacterium rhinotracheale DSM 15997

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>11185153_25_218
LFNGKDLSQWYAYSKATGVHDNAEEVFAVKDKAIKMYGKTPGYLMSKKSYKNFELTLQFR
WNDDASFERRMDTKNSGVMYLVPENQEDMLWPRGIQFQIKEGTTGDFIFLQGVTLDINGK
TTEAGKSVVYDRILSNEKPIGKWNKLQVICKDGKIIQKLNGKIVNQGENPNVQSGRILLQ
YEGFPIDFRKIKIK

Aligned sequence

>11185153_25_218
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------LF-N-GK--DL-SQ-------W
Y---AYSKATG---VH-DNAE------------------------------EVFAVKD-K
---------------------------AIK------------------------MYGKTP
G-YLMS-----K-----K--SY-K-NFELTLQFRW---------------ND-DASFER-
-------------------RMDTKNSGVMYLVP---------------------------
-ENQED---MLWPRGI-QFQIKE------GTTGDFIFLQ---------GVTLDINGKTTE
AGKSV-----------------------------------------------VYD-----
---RI--LSNEKPIGKWNKLQV--IC-K-DGK---------------II--Q-KLN-GKI
VNQGENPNV---------------------------------QSGRILLQ--YEG-----
-------F--------------------PID--FRKIKIK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory