Information about 11227501_33_203

Unaligned length: 171

Alignment length: 716

Description in the alignment: single domain, from Cyclobacterium marinum DSM 745

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>11227501_33_203
VVLFNGQDLNNWSSADMSYWSVSDGAIVGGEGKDSIGHNQFIWHKEKVKDFYLKVQVKMV
PNTTNAGIQFRSQKMGEEALGYQADIGEGVWGRLYHESGRQKLHWEGKGEAAVKKNEWNT
YEILALGNNIWTAINGTLSVAYQDPNGELEGFIALQVHAGPAQLVKYKPVK

Aligned sequence

>11227501_33_203
------------------------------------------------------------
------------------------------------------------------------
---------------------------------V---VLF-N-GQ--DL-NN-------W
S---SADMS-------YW------------------------------------SVSD-G
---------------------------AIVG-------------------GEGKDSIGHN
Q-FIWH-----K-----E--KV-K-DFYLKVQVKM---------------VP-NT-----
-----------------------TNAGIQFRSQ---------------------------
----KM---GEEALGY-QADIGE-----------------------------------GV
WGRLYHES---------------------------------------GRQ---KLH----
-WEGK--GEAAVKKNEWNTYEI--LA-L-GNN---------------IW--T-AIN-GTL
SVAYQDPNGE--------------------------------LEGFIALQ--VHAG----
-----PAQ--------------------LVK--YK-----PVK-------------

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