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Information about 1125827_671_892

Unaligned length: 222

Alignment length: 716

Description in the alignment: with redox domain, from Nitrosospira multiformis ATCC 25196

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>1125827_671_892
GFTYLFDGSDAQFANWEMAGGGSFSRFGRTIIAQQNEKGMGLLFYKPKPFEDFTLRLDFL
LPHPRGNGNDNSGVFVRFRDSRLPDPAPDPVDPADNAAFVAVHTGFEIQIDEEARGDTRF
GEPDGSFFARTGAIYKIKSLGTGEGQQNYQNNISLAARQWHHYEIEVKKQDYVVRLNGQE
VTRFKRSPSDTARGNPPSVDPNSGYIGLQTHTGNVAFANVRI

Aligned sequence

>1125827_671_892
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GFTYLF-D-GSDAQF-AN-------W
E---MAGGGSF---S----------------------------------------RFG-R
---------------------------TII----------------------AQQNEKGM
G-LLFY-----K----PK--PF-E-DFTLRLDFLL--------------PHP-RGNG---
----------------------NDNSGVFVRFRDSRLPDP-------------APDPVDP
ADNAAF---VAVHTGF-EIQIDE------EARGDTRF-------------GEPDGSFFAR
TGAIYKIKS-------------------------------------LGTGEGQQN-----
---YQ--NNISLAARQWHHYEI--EV-K-KQD---------------YV--V-RLN-GQE
VTRFKRSPSDTARGNPP---------------------SVDPNSGYIGLQ--THT-----
-------G--------------------NVA--FANVRI-----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory