Information about 11272043_27_202

Unaligned length: 176

Alignment length: 716

Description in the alignment: single domain, from Isosphaera pallida IS1B, ATCC 43644

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

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Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

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Sequence

>11272043_27_202
GFVPLFNGKDLEGWITPNLPGLFTVEDGVIVGRTDGTLKKNEFLVTRKRYGDFILKADVK
LVAGNSGIQFRSERADDGAVTGPQADVAEGYWGLLYEERRRGILDRSAVERAKTLVKPDD
YNQYVITAKGNHVVITLNGETVIDRRDPEFQADGVIALQVHVGPPMEVRFKNLLIK

Aligned sequence

>11272043_27_202
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GFVPLF-N-GK--DL-EG-------W
I---TP---NL---PGLF------------------------------------TVED-G
---------------------------VIV--------------------GRTDGTLKKN
E-FLVT-----R-----K--RY-G-DFILKADVK----------------LV-AG-----
------------------------NSGIQFRSE---------------------------
---RAD---DGAVTGP-QADVAE------GYWG--------------------LLYEERR
RGILD----------------------------------------------RSAV-----
---ER--AKTLVKPDDYNQYVI--TA-K-GNH---------------VV--I-TLN-GET
VIDRRDPEFQ--------------------------------ADGVIALQ--VHVG----
-----PPM--------------------EVR--FKNLLIK----------------

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