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Information about 11292681_28_217

Unaligned length: 190

Alignment length: 716

Description in the alignment: single domain, from Planctomyces brasiliensis DSM 5305

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>11292681_28_217
GWCELFNGSDLTGWEANDRPESFTVEDGLLKAHGKNGMSHLFYQGDTSEDVSFKDFELVA
VVKSEPKSNSGFFFHTDRALRKGKYLNKGYEVQLNSAPKEKHKTGSLYAVVQVDESPVDE
TDWFQIRIRVEGQRIQVFVNDQQLVDYTEPANPEREPSRAKRLLDPSGGAIAIQAHDPNS
IFYFKQIKIR

Aligned sequence

>11292681_28_217
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWCELF-N-GS--DL-TG-------W
E---AN---DR---PESF------------------------------------TVED-G
---------------------------LLK-----------------------AHGKNGM
S-HLFY-----QGDTSED-VSF-K-DFELVAVVKS---------------EP-KS-----
------------------------NSGFFFHTD---------------------------
RALRKG---KYLNKGY-EVQLNS------APKE------------------------KHK
TGSLYA-----------------------------------------------VV-----
---QV--DESPVDETDWFQIRI--RV-E-GQR---------------IQ--V-FVN-DQQ
LVDYTEPANPEREPSRAK-------------------RLLDPSGGAIAIQ--AHDP----
------NS--------------------IFY--FKQIKIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory